Gene SNSL254_A3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3567 
Symbol 
ID6483330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3456609 
End bp3456896 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content49% 
IMG OID642738847 
ProductDNA-binding transcriptional regulator Nlp 
Protein accessionYP_002042564 
Protein GI194445871 
COG category[K] Transcription 
COG ID[COG3423] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000426045 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCA AGCTTATTGA CTGGCATCCG GCCGATATCA TTGCCGGACT ACGTAAAAAA 
GGGACTTCAA TGGCCGCTGA GTCACGTCGG AATGGATTGA GTTCATCCAC GCTGGCCAAT
GCATTAACGC GCCCATGGCC GAAAGGAGAG TTGATTATCG CGAAAGCATT GGGAACGGAA
CCCTGGGTTA TTTGGCCATC GCGTTATCAC GATCCGCGCA CGCATGAGTT TATCGACAGA
ACGCGGCTTA TGAGAGCGCG TAATAAAAAC AAACAGAATG TAGAGTAA
 
Protein sequence
MESKLIDWHP ADIIAGLRKK GTSMAAESRR NGLSSSTLAN ALTRPWPKGE LIIAKALGTE 
PWVIWPSRYH DPRTHEFIDR TRLMRARNKN KQNVE