| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3560 |
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| Symbol | dacB |
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| ID | 6485223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3450713 |
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| End bp | 3452146 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642738840 |
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| Product | D-alanyl-D-alanine carboxypeptidase/endopeptidase |
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| Protein accession | YP_002042557 |
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| Protein GI | 194446146 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.515229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTTT CCAGATTTAT CATCGGATTG ACCACCAGTA TAGCGTTCAG CGTTCAGGCC
GCGAATATTG ACGAATACAT CAAACAGCTT CCGGCCGGCG CCAACCTCGC GCTGATGGTG
CAAAAGATTG GCGCGCCCGC GCCGGCTATT GATTATCATA GTCAGCAGAT GGCGCTTCCC
GCCAGTACCC AAAAGGTGAT TACCGCGCTG GCGGCGCTGA TTCAACTCGG CCCGGATTTC
CGTTTTACGA CCACGCTGGA GACTAAAGGC AACGTCGATA ACGGCATCCT GAAAGGTGAC
GTAATTGCGC GCTTCGGTGG CGATCCAACG CTAAGACGTC AGGATATTCG CAATATGGTC
GCGACGCTGA AAAAGTCAGG CGTCACGCAA ATCGACGGCA ATGTGCTTAT CGACACGTCG
ATTTTCGCCA GCCACGATAA AGCGCCAGGC TGGCCGTGGA ACGACCTGAC GCAGTGTTTC
AGCGCGCCTC CCGCCGCCGC CATTGTTGAC CGCAACTGTT TTTCTGTGTC GCTTTATAGC
GCGCAAAAAC CAAACGATTT AGCCTTTATT CGCGTGGCCT CTTATTATCC GGTAACGATG
TTCAGCCAGG TACGGACTCT ACCGCGCGGT TCGGCAGACG CGCAGTATTG CGAGCTGGAT
GTTGTGCCTG GCGATTTGAA CCGTTATACG CTTACCGGCT GTTTACCACA GCGCGCCGAC
CCGCTGCCGC TGGCCTTTGC TATTCAGGAC GGCGCCAGCT ACGCGGGCGC GATCCTCAAG
CAGGAACTGA AAGAGGCCGG GATAACTTAC CGCGGCACGC TGCTGCGCCA GACGCAGGTT
AACGAGCCCG GAACGATCGT CGCCAGTAAA CAGTCGGCGC CACTGCACGA TCTGCTTAAG
ATTATGCTGA AAAAGTCAGA CAACATGATC GCCGATACTG TTTTTCGGAT GATTGGTCAT
GTCAGGTTTA ACGTGCCTGG CACCTGGCGG GCGGGATCGG ATGCCGTTCG CCAGATTCTG
CGCCAACAGG CGGGAATTGA TATCGGCAAT ACCATTATTG CCGACGGTTC CGGTCTTTCT
CGCCATAATC TGATCGCTCC CGCCACGATG ATGCAGGTGC TGCAATATAT CGCCCAACAT
GATAACGAGC TGAACTTTAT CTCTATGCTG CCGCTGGCGG GCTATGATGG TTCATTACAA
TACCGCGCCG GGCTGCATCA GGCGGGCGTA GACGGTAAGG TTTCAGCGAA AACCGGGTCA
CTGCAGGGCG TGTATAATCT GGCGGGCTTT ATTACCACCG CAAGCGGGCA ACGGATGGCA
TTTGTACAGT ATTTGTCCGG CTACGCGGTT CCACCTGCCG ATCAGCGTAA TCGACGTATT
CCGCTGGTAC GCTTCGAGAG TCGATTGTAC AAGGATATTT ATCAGAATAA CTGA
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| Protein sequence | MRFSRFIIGL TTSIAFSVQA ANIDEYIKQL PAGANLALMV QKIGAPAPAI DYHSQQMALP
ASTQKVITAL AALIQLGPDF RFTTTLETKG NVDNGILKGD VIARFGGDPT LRRQDIRNMV
ATLKKSGVTQ IDGNVLIDTS IFASHDKAPG WPWNDLTQCF SAPPAAAIVD RNCFSVSLYS
AQKPNDLAFI RVASYYPVTM FSQVRTLPRG SADAQYCELD VVPGDLNRYT LTGCLPQRAD
PLPLAFAIQD GASYAGAILK QELKEAGITY RGTLLRQTQV NEPGTIVASK QSAPLHDLLK
IMLKKSDNMI ADTVFRMIGH VRFNVPGTWR AGSDAVRQIL RQQAGIDIGN TIIADGSGLS
RHNLIAPATM MQVLQYIAQH DNELNFISML PLAGYDGSLQ YRAGLHQAGV DGKVSAKTGS
LQGVYNLAGF ITTASGQRMA FVQYLSGYAV PPADQRNRRI PLVRFESRLY KDIYQNN
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