Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3533 |
Symbol | |
ID | 6482208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3424693 |
End bp | 3425571 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642738816 |
Product | peptidase, U32 family |
Protein accession | YP_002042535 |
Protein GI | 194442783 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 106 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATATT CCTTAGGACC GGTGCTTTAT TACTGGCCGA AAGAGACGCT GGAAGATTTT TATCAGCAGG CCGCAAAAAG CAGCGCTGAT GTCATTTATC TGGGCGAAGC GGTGTGCAGC AAGCGTCGCG CGACCAAAGT CGGCGACTGG CTGGAAATGG CGAAATCCCT CGCCGCCAGC GGTAAGCAGG TGGTGCTCTC CACCCTGGCG CTGGTACAGG CGTCATCTGA ATTAAGCGAG CTGAAACGCT ATGTGGACAA CGGCGATTTT CTGCTGGAAG CCAGCGATCT TGGCGTGGTG AATCTGTGCG CCGAGCGCAA ACTGCCGTTT GTCGCCGGCC ATGCGCTGAA TTGCTACAAC GCGGTCACGC TGCGCCGGTT GCTGAAAGAA GGCATGGTAC GCTGGTGTAT GCCGGTGGAG CTCTCCCGCG ACTGGCTGGT GAATTTGCTT AATCAGTGCG ATGAACTGGG CATCCGCAAT CAGTTTGAAG TGGAAGTGTT GAGCTACGGG CATCTGCCGC TGGCCTACTC CGCTCGCTGC TTTACCGCCC GTTCGGAAGA CCGCCCGAAA GATGAGTGCG AAACCTGCTG TATCAAGTAT CCAAACGGTC GTGACGTGCT CTCGCAAGAG AATCAGCAGG TGTTTGTGCT TAACGGTATT CAGACCATGA GCGGCTATGT CTATAACCTT GGCAACGAAC TGACGTCGAT GCAGGGATTG GTCGATATCG TGCGGCTGTC GCCGTTGGGG ACGGAGACAT TTGCCATGCT TGATGCCTTT CGCGCTAACG AAAACGGCGG CGCGCCATTA CCGCTTGCCG CGCATAGCGA CTGTAACGGC TACTGGAAGC GGCTGGCAGG TCTGGAGCTA CAGGCCTAG
|
Protein sequence | MKYSLGPVLY YWPKETLEDF YQQAAKSSAD VIYLGEAVCS KRRATKVGDW LEMAKSLAAS GKQVVLSTLA LVQASSELSE LKRYVDNGDF LLEASDLGVV NLCAERKLPF VAGHALNCYN AVTLRRLLKE GMVRWCMPVE LSRDWLVNLL NQCDELGIRN QFEVEVLSYG HLPLAYSARC FTARSEDRPK DECETCCIKY PNGRDVLSQE NQQVFVLNGI QTMSGYVYNL GNELTSMQGL VDIVRLSPLG TETFAMLDAF RANENGGAPL PLAAHSDCNG YWKRLAGLEL QA
|
| |