Gene SNSL254_A3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3533 
Symbol 
ID6482208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3424693 
End bp3425571 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content56% 
IMG OID642738816 
Productpeptidase, U32 family 
Protein accessionYP_002042535 
Protein GI194442783 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATT CCTTAGGACC GGTGCTTTAT TACTGGCCGA AAGAGACGCT GGAAGATTTT 
TATCAGCAGG CCGCAAAAAG CAGCGCTGAT GTCATTTATC TGGGCGAAGC GGTGTGCAGC
AAGCGTCGCG CGACCAAAGT CGGCGACTGG CTGGAAATGG CGAAATCCCT CGCCGCCAGC
GGTAAGCAGG TGGTGCTCTC CACCCTGGCG CTGGTACAGG CGTCATCTGA ATTAAGCGAG
CTGAAACGCT ATGTGGACAA CGGCGATTTT CTGCTGGAAG CCAGCGATCT TGGCGTGGTG
AATCTGTGCG CCGAGCGCAA ACTGCCGTTT GTCGCCGGCC ATGCGCTGAA TTGCTACAAC
GCGGTCACGC TGCGCCGGTT GCTGAAAGAA GGCATGGTAC GCTGGTGTAT GCCGGTGGAG
CTCTCCCGCG ACTGGCTGGT GAATTTGCTT AATCAGTGCG ATGAACTGGG CATCCGCAAT
CAGTTTGAAG TGGAAGTGTT GAGCTACGGG CATCTGCCGC TGGCCTACTC CGCTCGCTGC
TTTACCGCCC GTTCGGAAGA CCGCCCGAAA GATGAGTGCG AAACCTGCTG TATCAAGTAT
CCAAACGGTC GTGACGTGCT CTCGCAAGAG AATCAGCAGG TGTTTGTGCT TAACGGTATT
CAGACCATGA GCGGCTATGT CTATAACCTT GGCAACGAAC TGACGTCGAT GCAGGGATTG
GTCGATATCG TGCGGCTGTC GCCGTTGGGG ACGGAGACAT TTGCCATGCT TGATGCCTTT
CGCGCTAACG AAAACGGCGG CGCGCCATTA CCGCTTGCCG CGCATAGCGA CTGTAACGGC
TACTGGAAGC GGCTGGCAGG TCTGGAGCTA CAGGCCTAG
 
Protein sequence
MKYSLGPVLY YWPKETLEDF YQQAAKSSAD VIYLGEAVCS KRRATKVGDW LEMAKSLAAS 
GKQVVLSTLA LVQASSELSE LKRYVDNGDF LLEASDLGVV NLCAERKLPF VAGHALNCYN
AVTLRRLLKE GMVRWCMPVE LSRDWLVNLL NQCDELGIRN QFEVEVLSYG HLPLAYSARC
FTARSEDRPK DECETCCIKY PNGRDVLSQE NQQVFVLNGI QTMSGYVYNL GNELTSMQGL
VDIVRLSPLG TETFAMLDAF RANENGGAPL PLAAHSDCNG YWKRLAGLEL QA