Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3481 |
Symbol | |
ID | 6484872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3377683 |
End bp | 3378819 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642738768 |
Product | methyltransferase family protein |
Protein accession | YP_002042487 |
Protein GI | 194446650 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACG TAGACGACGG TTTCCGTTCA CTGACGCTGA AACGTTTTCC GCAAACGGAT GATGTTAACC CGCTTCTGGC GTGGGAGGCG GCCGATGAGT ATCTGCTGCA ACAGTTGGAT GAGACGGAAA TTCGCGGCCC GGTGCTGATC CTGAATGATA CGTTTGGCGC GCTAAGCTGT GCGCTGGCGG AGCATTCGCC ATACAGTATT GGCGATTCGT ATTTAAGCGA ACTGGGTACG CGAGAGAATT TACGCCATAA CGGCATCGCG GAGTCCAGCG TAACGTTTCT CGACAGTACC GCTGACTACC CGCAGGCGCC GGGCGTGGTA TTGATTAAGG TACCGAAAAC ACTGGCATTG CTGGAACAGC AGTTACGCGC TTTGCGTAAG GTCGTTACGG CGCAAACGCG TATTATCGCC GGCGCGAAAG CGCGTGATAT TCATACCTCT ACGCTGGAAC TGTTTGAAAA AGTGCTGGGC CCAACCACGA CGACGCTGGC GTGGAAGAAA GCGCGCCTGA TTAACTGTAC CTTCAGTCAT CCGCAACTGC CCGACGCGCC GCAAACGCTA AGCTGGAAAC TGGAAGATAC AGGCTGGACG ATTCACAACC ACGCGAATGT GTTTTCTCGT ACCGGATTGG ATATCGGCGC GCGCTTCTTT ATGCAGCATT TGCCGGAAAA CCTCGACGGG GAGATTGTCG ATCTCGGCTG CGGCAATGGG GTGATTGGCC TGAGCTTACT GGCGAAAAAT CCGCAGGCGA AAGTGGTATT TGTCGATGAA TCGCCGATGG CGGTAGATTC CAGCCGTTTG AATGTAGAAA CGAACCTGCC GGAAGCGTTC GAACGCTGCG AATTTATGAT CAACAATGCG CTCTCCGGCG TGGAGCCGTT CCGTTTTAAC GCTGTGTTCT GCAACCCGCC GTTCCACCAG AAACATGCGC TGACGGATAA TATCGCCTGG GAGATGTTCC ATCATGCCCG CCGCTGCCTG AAAATCAACG GCGAACTGTA TATTGTGGCG AACCGCCATC TGGACTATTT CCACAAGCTG AAGAAGATTT TCGGTAATTG CGCGACGATA GCAACCAACA ATAAATTTGT TATTTTGAAA GCGGTGAAGC AGGGACGCCG TCGATAA
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Protein sequence | MSHVDDGFRS LTLKRFPQTD DVNPLLAWEA ADEYLLQQLD ETEIRGPVLI LNDTFGALSC ALAEHSPYSI GDSYLSELGT RENLRHNGIA ESSVTFLDST ADYPQAPGVV LIKVPKTLAL LEQQLRALRK VVTAQTRIIA GAKARDIHTS TLELFEKVLG PTTTTLAWKK ARLINCTFSH PQLPDAPQTL SWKLEDTGWT IHNHANVFSR TGLDIGARFF MQHLPENLDG EIVDLGCGNG VIGLSLLAKN PQAKVVFVDE SPMAVDSSRL NVETNLPEAF ERCEFMINNA LSGVEPFRFN AVFCNPPFHQ KHALTDNIAW EMFHHARRCL KINGELYIVA NRHLDYFHKL KKIFGNCATI ATNNKFVILK AVKQGRRR
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