Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3474 |
Symbol | |
ID | 6487019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3368488 |
End bp | 3369255 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642738761 |
Product | siderophore-interacting protein |
Protein accession | YP_002042480 |
Protein GI | 194446736 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2375] Siderophore-interacting protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.131537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACAT CATCTGCACG CTATCCACAG CGTGTTCGTA ATGAACTGCG TTTTCGCGAG CTGACCGTTC TGCGGGTAGA ACGTATTAGC GCAGGATTTC AGCGGATCGT ACTTGGCGGC GAGGCGCTGG ACGGTTTCAC CTCCCTGGGC TTTGACGATC ACACGAAAGT TTTTTTCCCT GAGCCAGGCT GTCGCTTTAC GCCTCCGACA GTCACTGAGG AAGGCATTAT CTGGGGGGAG GGCGTTCGTC CGGTCTCCAG GGATTACACG CCGCTGTATG ACGAGGCGCG TCGCGAGCTG GCGCTGGATT TCTTTATCCA CGATGGCGGC GTAGCCAGCC GTTGGGTAAT GGAAGCCCGT GAAGGCGATA CACTGACGAT CGGCGGGCCG CGCGGTTCGC TGGTGGTGCC GGAAGATTAT GCCTGTCAGG TTTATGTCTG CGATGAGTCC GGTATGCCTG CGCTACGTCG TCGTCTGGAA TCGCTTAGCC GTCTGCCTGC GCGCCCTGCG GTAACCGCGC TGGTGAGCAT TCAGGATGCG GCATATCGCG ATTATCTCGC CCATTTGACG GATATTACTG TGGAATATGT TGTTGGCGGC GATGAACAGG CAATGCAAAC GCGCCTGTCG CAGCTGACAA TACCAGAATC AGACTATTTC ATCTGGATTA CTGGCGAAGG CAAAACGGTA AAACGTTTAA GTCAGTGCTT TGAAAAGGGG TTTGATCCAC ACCTGGTACG TGCGGCAGCC TATTGGCATC GTAAATAG
|
Protein sequence | MTTSSARYPQ RVRNELRFRE LTVLRVERIS AGFQRIVLGG EALDGFTSLG FDDHTKVFFP EPGCRFTPPT VTEEGIIWGE GVRPVSRDYT PLYDEARREL ALDFFIHDGG VASRWVMEAR EGDTLTIGGP RGSLVVPEDY ACQVYVCDES GMPALRRRLE SLSRLPARPA VTALVSIQDA AYRDYLAHLT DITVEYVVGG DEQAMQTRLS QLTIPESDYF IWITGEGKTV KRLSQCFEKG FDPHLVRAAA YWHRK
|
| |