Gene SNSL254_A3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3457 
Symbol 
ID6483166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3349112 
End bp3349732 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content53% 
IMG OID642738745 
Productinner membrane protein YqiJ 
Protein accessionYP_002042465 
Protein GI194445581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.832198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTAT TTGCGGAGTA TAACAGCCCC TATCTGTTTG CCATTGCGTT CGTTTTCTTT 
ATCGGCGTGC TGGAGATGAT TTCTCTGATT TTTGGCCACT TTCTTTCAGG CGCGCTCGAC 
GCCCATCTCG ATCATTATGA CGCCCTGTCA TCCGGCCCTG CGGGCCAGGC GCTTCATTAT 
CTGAATATTG GACGCGTTCC CGCCCTGGTC GTCCTCTGTC TATTGGCCGG CTATTTCGGC 
CTCTTCGGTA TCCTCATCCA GCATGGCGGG ATCATGCTCT GGCAGGCGCC GCTCAGCAAT 
CTGCTGCTGG TCCCGTTAAG CATTGTCCTG TCGGTCTTTG CCGTGCATTA CAGCGGAAAA 
ATCCTCGCGC CCTGGCTACC CAGAGATGAA AGCTCCGCCC TCAGGGAAGA GGAATTTATC 
GGCGGCATGG CGATTATTAC CGGCCACGCC GCCGTCGCCG GTACACCTTG CGAAGGAAAA 
TTTACCGATA AGTTCGGCCA GATTCACTAT TTACTGCTGG AACCCGAAAA GGGAAAAGAA 
TTTAAAAAAG GAGACAAGGT GCTGATTGTC TGCCGACTTT CCGCAACGCG TTATTTGGCT 
GAGCGTACCT TCTATGTTTA A
 
Protein sequence
MTLFAEYNSP YLFAIAFVFF IGVLEMISLI FGHFLSGALD AHLDHYDALS SGPAGQALHY 
LNIGRVPALV VLCLLAGYFG LFGILIQHGG IMLWQAPLSN LLLVPLSIVL SVFAVHYSGK 
ILAPWLPRDE SSALREEEFI GGMAIITGHA AVAGTPCEGK FTDKFGQIHY LLLEPEKGKE 
FKKGDKVLIV CRLSATRYLA ERTFYV