| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3386 |
|---|
| Symbol | exuT |
|---|
| ID | 6484503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3283753 |
|---|
| End bp | 3285057 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642738677 |
|---|
| Product | hexuronate transporter |
|---|
| Protein accession | YP_002042397 |
|---|
| Protein GI | 194444620 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.333246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 0.392835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATGA CAAAATTAAG ATGGTGGATT ATCGGCCTGG TCTGCGTAGG GACCATCGTA
AACTACCTGT CCCGTAGCTC GCTTAGCGTT GCGGCGCCAG CGATGATGAA AGAACTCCAT
TTTGATGAGC AACAATATTC CTGGGTGGTG AGCGCCTTCC AGCTTTGTTA CACCATTGCG
CAGCCGATCA CCGGCTATTT GATGGATGTC ATCGGACTGA AAATCGGCTT CTTTATCTTT
GCCTTGTTAT GGTCGCTGAT CAACATGGCG CACGCGCTGG CCGGCGGCTG GATAAGTCTG
GCACTTCTGC GTGGTCTGAT GGGGCTAACC GAAGCGTCAG CGATTCCGGC CGGGATTAAA
GCCAGCGCCG AATGGTTCCC GACGAAAGAA CGCGGTATTG CGGGGGGACT GTTTAATATC
GGTACTTCGA TTGGCGCGAT GCTGGCGCCG CCGCTGGTGG TCTGGGCGAT GCTGACCTTT
GCTGATAGCG GCATCGGTAC TGAAATGGCG TTTGTGATTA CCGGTGGGAT CGGCGTGCTG
TTCGCCATCA CCTGGTTCCT GATTTATAAC TCGCCAAATA AACACCCGTG GATCACCCAC
AAAGAGCTGC GTTATATCGA AGACGGCCAG GAAAGCTATC TCCAGGACGA TAATAAAAAA
CCGGCCGTTA AAGAGATCGT TAAAAAGCGT AACTTCTGGG CGTTGGCGAT TACCCGTTTT
CTTGCTGACC CGGCATGGGG AACGCTGAGT TTCTGGATGC CGCTGTATCT GATTAACGTG
ATGCATCTGC CGTTAAAAGA GATCGCCATG TTTGCCTGGC TGCCGTTCCT GGCGGCGGAC
TTCGGCTGCG TTGCAGGCGG TTTCCTGGCG AAGTTCTTCA TGGAAAAGAT GCACATGACC
ACGATCAATG CGCGTCGTTG TAGCTTTACC ATCGGCGCTG TTTTGATGAT TTCGATCGGT
TTTGTCAGCA TTACGACTAA CCCGTATGTC GCCATTGCAT TGATGAGTAT TGGCGGTTTT
GCGCACCAGA CGCTGTCTAC CGTCGTGATT ACCATGAGCG CTGACCTGTT CAAGAAAAAT
GAGGTCGCGA CGGTTGCCGG TCTGGCAGGA TCTGCGGCAT GGATGGGACA GTTAAGCTTC
AACCTGTTTA TGGGGGCATT GGTCGCTATT ATCGGTTACG GCCCGTTCTT CATTGCACTC
AGTCTGTTCG ATATTATCGG CGCCATCATC CTGTGGGTAC TGATTAAAGA TCCGGAAAAG
CACCACCCGC CAATGACGGA ACAGCCGCTG GCGTCTCACC GCTAA
|
|---|
| Protein sequence | MKMTKLRWWI IGLVCVGTIV NYLSRSSLSV AAPAMMKELH FDEQQYSWVV SAFQLCYTIA
QPITGYLMDV IGLKIGFFIF ALLWSLINMA HALAGGWISL ALLRGLMGLT EASAIPAGIK
ASAEWFPTKE RGIAGGLFNI GTSIGAMLAP PLVVWAMLTF ADSGIGTEMA FVITGGIGVL
FAITWFLIYN SPNKHPWITH KELRYIEDGQ ESYLQDDNKK PAVKEIVKKR NFWALAITRF
LADPAWGTLS FWMPLYLINV MHLPLKEIAM FAWLPFLAAD FGCVAGGFLA KFFMEKMHMT
TINARRCSFT IGAVLMISIG FVSITTNPYV AIALMSIGGF AHQTLSTVVI TMSADLFKKN
EVATVAGLAG SAAWMGQLSF NLFMGALVAI IGYGPFFIAL SLFDIIGAII LWVLIKDPEK
HHPPMTEQPL ASHR
|
|---|
| |