Gene SNSL254_A3332 details

Gene Information

• Locus tag: SNSL254_A3332
• ID: 6483141
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Newport str. SL254
• Kingdom: Bacteria
• Replicon accession: NC_011080
• Strand: -
• Start bp: 3237382
• End bp: 3238113
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642738623
• Product: putative outer membrane lipoprotein
• Protein accession: YP_002042344
• Protein GI: 194442431

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 56
• Fosmid unclonability p-value: 0.111957
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCAAAT TTAAATTTAA TGCCGTCATT GTTGGCTTGT TTTTGCTGTT AGGCGGTTGT 
TCCAGCGGAA TGCAATCTAA TAATGGCTCT TCATCCGACG TCGGCACCGC CTGGGGCGGC 
GACGTGCATT CATCGGTACA AAGCGTTTCG GTAGAACGTG CCGATCGAGA ACCTGCCGAA 
ATGGTGGTAA TAAATTACTC CACTCAATAT CCGTCAGGTT ACGATAAAGT TTATAGTATA 
CGTATCAGCG ATCTTGAATA TGCTGTGCGC GACGCTAATT TTAATTCGAT TCCAATTACT 
CGTCGCTACA ACGCATCAAT GGGACAATGG CAATATAGTA TTCCTGCAAG ATCAGGGATG 
AACTATCAGT TATATATCCG TAATTACAGT CATGATACCA ATTACGAAAT CGTCGCAACG 
GTTGATGGCC TGGACGTGTT GAACGGAAAA GCAGGCTCGC TGAATCATCA TGGCTATATT 
GTTAACGCCG GCGATTCACT GGCGATTAAA GGGTTTCGCA AAGATAAACA CACTGAGGCG 
GCATTCCAGT TCGCCGACAT AGCTGACGCT TATGCGGCCC ACTCCGCGCA GGGCGATGTA 
CGCAACATCG GCGTCATCGG CTTTGCCGCT TTTGCATTGC AGGGTAAAGC AACAAATACG 
CTACCGCCTT GTTCCTCACA GGCTTTCCCG GCGGACAATA ACGGGTATGC GCCGCCGCCC 
TGCCGCAAAT AA 

 

Protein sequence

MSKFKFNAVI VGLFLLLGGC SSGMQSNNGS SSDVGTAWGG DVHSSVQSVS VERADREPAE 
MVVINYSTQY PSGYDKVYSI RISDLEYAVR DANFNSIPIT RRYNASMGQW QYSIPARSGM 
NYQLYIRNYS HDTNYEIVAT VDGLDVLNGK AGSLNHHGYI VNAGDSLAIK GFRKDKHTEA 
AFQFADIADA YAAHSAQGDV RNIGVIGFAA FALQGKATNT LPPCSSQAFP ADNNGYAPPP 
CRK