Gene SNSL254_A3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3272 
Symbol 
ID6487052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3181109 
End bp3181861 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content54% 
IMG OID642738569 
Producthypothetical protein 
Protein accessionYP_002042290 
Protein GI194442369 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCAG GACGCCTGAA CAAAAATAGC CTGGGTATTG CGGTGCTGTT ATGCACAGGG 
CTGCTGCTGG CGGGGTGTTC CAGTAATTCC GGCTCAGGAA CGTATTCCGG CTCCGTCTAT
ACCGTTAAGC GCGGCGATAC GTTGTATCGT ATATCGCGCG CTACGGGAAC CAGCGTGAAA
GAACTGGCCC GACTGAATGG CATTTCTCCG CCTTATACTA TTGAGGTGGG GCAGCGAATT
AAAGTGCGCG GCAGCGCAAA GAGTAGCAGT TCAACACGCA AAACCAGCAA TAAAACAGCA
ACAAAAACTG CTGCGGTCAG ACCGTCATCT TCGGTGCCAA AATCCTCCTG GCCGCCGGTG
GGGCAGCGTT GTTGGGTATG GCCTGCTAAC GGTAAAGTGA TTTTACCTTA TTCCACCGCG
GAGGGCGGAA ATAAGGGGAT CGATATTGCG GGCGCGCGCG GAACGCCTGT TTATGCGGCG
GGAGCGGGTA AAGTTGTCTA TGTCGGGAAC CAGCTGCGCG GTTACGGCAA TCTCATCATG
ATTAAGCACA ATGAAGATTA CATTACGGCT TACGCTCATA ATGACACCAT GCTGGTTAAT
AATGGACAAA GCGTTAAAGC GGGGCAAAAA ATCGCTACGA TGGGCAGCAC GGATGCCGCA
TCCGTAAGAC TACACTTCCA GATTCGCTAC CGGGCGACGG CCATCGATCC GCTGCGTTAT
CTGCCGCCGC AGGGGAGTAA ACCGAAGTGC TGA
 
Protein sequence
MSAGRLNKNS LGIAVLLCTG LLLAGCSSNS GSGTYSGSVY TVKRGDTLYR ISRATGTSVK 
ELARLNGISP PYTIEVGQRI KVRGSAKSSS STRKTSNKTA TKTAAVRPSS SVPKSSWPPV
GQRCWVWPAN GKVILPYSTA EGGNKGIDIA GARGTPVYAA GAGKVVYVGN QLRGYGNLIM
IKHNEDYITA YAHNDTMLVN NGQSVKAGQK IATMGSTDAA SVRLHFQIRY RATAIDPLRY
LPPQGSKPKC