Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3225 |
Symbol | |
ID | 6482225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3141146 |
End bp | 3141670 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642738525 |
Product | hypothetical protein |
Protein accession | YP_002042247 |
Protein GI | 194443939 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4795] Type II secretory pathway, component PulJ |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.0159896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGCGA TGGCGATAGG TTCCATTTTA CTGCTTGGGT CCGCACGATT TTTACCGGCG CTACAGCGTG AAATCTGGCA CAACACGCGA CAGTTATCGC TGGAAGATGA AATCTGGCAG CGAACCTATA CCGTAGCGAA GCATCTTCAA CGTGCGGGTT ACTGTCATGG TCACTGTATT GGCGAAGGGT TACATCTTGC CGAACAGGGG CAATGCGTCA TCGTTCAGTG GGACGGGAAT AATAACGGTG TCTGGGATAC CATACCGGCG AAAGAGGCCG ACCAGACCGG GTTTCGTGTG AAGGATAACG TTCTGGAGAC ATTACGCGGA GCAACATCTT GCCAGGGTAA GGGATGGGAA AAAATGACCG ATCCCAATAC GGTACTCATC ACGGCGTTTA CCGTTGAGCG CCGGGATATA ACGGGATTCT CGCCAGTGCT CATGCTGCAT CTGCGCGGCG CCAGCAAAGC CGAGCCTCAG ACGGTTATTG ACGCGCAATA CAGCGTAACG GGATTTAATC TGTGA
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Protein sequence | MLAMAIGSIL LLGSARFLPA LQREIWHNTR QLSLEDEIWQ RTYTVAKHLQ RAGYCHGHCI GEGLHLAEQG QCVIVQWDGN NNGVWDTIPA KEADQTGFRV KDNVLETLRG ATSCQGKGWE KMTDPNTVLI TAFTVERRDI TGFSPVLMLH LRGASKAEPQ TVIDAQYSVT GFNL
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