| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3078 |
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| Symbol | eprI |
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| ID | 6485810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2992579 |
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| End bp | 2992821 |
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| Gene Length | 243 bp |
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| Protein Length | 80 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642738392 |
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| Product | type III secretion apparatus needle protein |
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| Protein accession | YP_002042116 |
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| Protein GI | 194445347 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02105] type III secretion apparatus needle protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.000627693 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAACAC CTTGGTCAGG CTATCTGGAT GACGTCTCAG CAAAATTTGA TACGGGCGTT
GATAATCTAC AAACGCAGGT AACAGAGGCG CTGGATAAAT TAGCAGCAAA ACCCTCCGAT
CCGGCGCTAC TGGCGGCGTA TCAGAGTAAG CTCTCGGAAT ATAACTTGTA CCGTAACGCG
CAATCGAACA CGGTAAAAGT CTTTAAGGAT ATTGATGCTG CCATTATTCA GAACTTCCGT
TAA
|
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| Protein sequence | MATPWSGYLD DVSAKFDTGV DNLQTQVTEA LDKLAAKPSD PALLAAYQSK LSEYNLYRNA
QSNTVKVFKD IDAAIIQNFR
|
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| |