Gene SNSL254_A3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3045 
Symbol 
ID6484488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2966624 
End bp2967169 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content57% 
IMG OID642738360 
Productelectron transport protein HydN 
Protein accessionYP_002042084 
Protein GI194443395 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.062215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTT TCATCATTGC AGACGCGAGT AAGTGCATTG GTTGCCGTAC CTGTGAAGTG 
GCTTGCGTCG TATCCCATCA GGAAAATCAG GATTGCGCAT CGCTGACCCC TGAAACCTTT
TTACCTCGTA TCCATGTCAT CAAAGGCGTG AACGTTTCCA CGGCAACGCT GTGTCGCCAG
TGTGAAGACG CGCCGTGCGC CAACGTTTGC CCGAATGGCG CCATCAGCCG TGACAAAGGC
TTTGTTCATG TGATGCAGGA ACGCTGCATT GGCTGTAAAA CTTGCGTAGT GGCATGTCCT
TACGGCGCCA TGGAAGTGGT GGTACGTCCG GTGGTTCGCA ATAGCGGCGC GGGGCTGAAC
GTGCGTGCCG AAAAAGCCGA AGCCAACAAG TGCGATCTGT GTCACCACCG TGAGGCCGGT
CCGGCCTGTA TGGCCGCTTG CCCAACGCAC GCCCTCATCT GCGTGGACCG CAATAAGCTT
GAACAGCTAA GCGCGGAAAA ACGCCGTCGT GCGGCGCTGG ATTCAACGGC ATCGCTGCTT
TTCTGA
 
Protein sequence
MNRFIIADAS KCIGCRTCEV ACVVSHQENQ DCASLTPETF LPRIHVIKGV NVSTATLCRQ 
CEDAPCANVC PNGAISRDKG FVHVMQERCI GCKTCVVACP YGAMEVVVRP VVRNSGAGLN
VRAEKAEANK CDLCHHREAG PACMAACPTH ALICVDRNKL EQLSAEKRRR AALDSTASLL
F