| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2979 |
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| Symbol | hoxN |
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| ID | 6486094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2907853 |
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| End bp | 2908866 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642738295 |
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| Product | high-affinity nickel transport protein |
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| Protein accession | YP_002042024 |
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| Protein GI | 194445294 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3376] High-affinity nickel permease |
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| TIGRFAM ID | [TIGR00802] high-affinity nickel-transporter, HoxN/HupN/NixA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.439261 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAATC ATACTAAACG ACGGGGAATA GCATTAACCG TTTTTCTTGT CGGTGTTAAC
ATCCTGGCCT GGATTTGGGC GTTCTGTGTT TTTCATCACC ATGCCGTCAT GCTAAGCGCA
GCCATACTGG CGTATAGCTT TGGGCTGCGT CATGCGGTTG ATGCCGATCA TATCGCAGCC
ATCGATACCG TCACCCGTAA ACTGATGCAG CAGGGTAAAA CGCCTTTAGG CGTGGGGGCG
TTTTTTTCAT TGGGTCATTC GACCATTGTC GTTCTGGCAT GTCTGGCGAT TGTTGTGACG
TCGATGGCAT TTCGCGATCG TATTGATGTT TTGCATCAAT ATGGTTCGTT GATTGGTACG
GCTGTTTCCG CTTTTTTTCT GCTGGCGATG GCCCTGCTTA ACCTGTTTAT TTTGTTCAAC
GTCTGGCGGC AATTTCGCTC GGTTACCCGC GGCGAGTCAG TGAGGGCGCA TGACGAGGCC
ATACCTGGCG GGCTGATGAC GCGTATATTT CAGCGTACGT TTCGTTTGGT CACTTCCAGT
TGGCATATGT ATTTTGTCGG TTTTCTGTTT GGTCTGGGAT TTGATACCGC AACCGAGGTT
GGGTTGCTGG GCATTTCCGC TTCAGCAGCT AACCAGGGGC TATCTCTCTG GTCAATGATG
ATTTTTCCTG TGCTGTTTAC CGCCGGGATG GCGCTGGTAG ATTCCCTGGA TAACTTTGTC
ATGGTCGGCG CTTACGGTTG GGCTTTCTCG CATCCATTAC GTAAGCTTTA TTATAATATG
ACCATTACCG CCGCATCCGT CATTGTCGCG CTGGCGATTG GCGGACTTGA GGCGCTGGGG
TTGATTGATG ATGCGTTACA GTTAAGCGGA ACATTTTGGC AGACCGTCAG CACGCTTAAC
GATCATATGG GGAATGTGGG CTTCTGGGTA GTGGGTGCTT TTGTGCTATT CTGGCTGCTC
TCGTTGTTGA ATTATCGCTG GCGCGGCTAT GATAAAATCA CCCTCAATAC CTGA
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| Protein sequence | MNNHTKRRGI ALTVFLVGVN ILAWIWAFCV FHHHAVMLSA AILAYSFGLR HAVDADHIAA
IDTVTRKLMQ QGKTPLGVGA FFSLGHSTIV VLACLAIVVT SMAFRDRIDV LHQYGSLIGT
AVSAFFLLAM ALLNLFILFN VWRQFRSVTR GESVRAHDEA IPGGLMTRIF QRTFRLVTSS
WHMYFVGFLF GLGFDTATEV GLLGISASAA NQGLSLWSMM IFPVLFTAGM ALVDSLDNFV
MVGAYGWAFS HPLRKLYYNM TITAASVIVA LAIGGLEALG LIDDALQLSG TFWQTVSTLN
DHMGNVGFWV VGAFVLFWLL SLLNYRWRGY DKITLNT
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