Gene SNSL254_A2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2972 
Symbol 
ID6482593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2900230 
End bp2902404 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content51% 
IMG OID642738289 
Productouter membrane receptor FepA 
Protein accessionYP_002042018 
Protein GI194445596 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0370731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTTA AGAAGTTCAT CTGGTTAATA ACCGTGGTTT CTACAGGGGT TAATAGTCCA 
TTATCAGCAG CAGAATCTAC TGACGACAAC GGCGAAACGA TGGTGGTTGA ATCCACCGTC
GAGCAAGTAT TAAAGCAACA GCCGGGCGTT TCGATTATTA CTCGTGACGA TATTCAAAAG
AATCCTCCCG TTAACGATCT TGCCGATATT ATTCGTAAGA TGCCTGGGGT TAATCTTACC
GGCAATAGCG CCTCGGGGAC GCGCGGAAAT AACCGACAAA TTGATATTCG TGGTATGGGG
CCGGAAAATA CCTTAGTGCT GATTGACGGC GTGCCGGTGA CGTCGCGAAA TTCGGTTCGC
TATAGCTGGC GCGGAGAACG CGACACCCGT GGCGATACGA ACTGGGTACC GCCGGAGATG
GTAGAACGTA TTGAAGTGAT CCGTGGGCCC GCCGCCGCGC GCTATGGCTC CGGTGCCGCT
GGCGGGGTGG TGAATATCAT CACCAAACGT CCGACTAACG ACTGGCACGG CTCGCTGTCG
CTCTATACCA ACCAGCCGGA AAGCAGCAAA GAAGGTGACA CCAGGCGGGG TAACTTTAGC
CTTAGCGGCC CGTTGGCTGG TGATACGTTG ACGATGCGCC TGTACGGTAA TCTCAACAGA
ACCGATGCCG ACAGCTGGGA TATTAACTCC TCCGCCGGTA CCAAAAATGC CGCCGGACGG
GAGGGGGTCA CCAATAAAGA TATTAATAGC GTCTTCTCAT GGAAAATGAC CCCGCAGCAA
ATCCTTGATT TTGAAGCGGG ATACAGTCGG CAGGGGAATA TCTATGCCGG CGATACGCAA
AACAGTACTT CGAACGCGGT TACTAAAAGT CTCGCGCAGT CCGGGCGGGA GACCAATCGC
CTGTACCGGC AGAATTACGG TCTAACTCAT AACGGCATCT GGGACTGGGG GCAAAGCCGC
CTGGGGTTCT ACTATGAAAA AACCGATAAC ACCCGCATGA ATGAGGGGCT CTCCGGCGGC
GGCGAGGGGC GTATTACCAA CGACCAGACG TTTACCACTA ACCGCCTGAC CTCGTATCGC
ACCAGCGGCG AGGTGAATGT CCCGGTGATA TGGCTATTTG AGCAAACGCT CACCGTCGGC
GCGGAATGGA ACCGCGATGA GCTGAACGAT CCTTCCTCTA CCAGTCTGAC GGTTAAGGAT
AGCAATATCG CCGGGATTCC CGGTTCGGCG GCTAACCGTA GCAGCAAAAA TAAATCGGAA
ATCAGTGCGC TGTACGTTGA AGATAATATC GAACCCATGG CCGGTACCAA TATTATTCCG
GGTCTGCGTT TTGACTATTT GAGCGAATCC GGGAGTAATT TTAGTCCCAG TCTTAACCTT
TCCCAGGAGT TAGGTGAATA CGTCAAGGTG AAAGCCGGTA TTGCCCGGGC CTTTAAGGCA
CCGAACTTGT ATCAAACCAG TGAGGGGTAT TTACTCTATT CGAAAGGCAA CGGTTGTCCA
AAAGATATTA CGTCAGGCGG CTGTTACCTG GTCGGTAATA AGAACCTCGA TCCTGAAATT
AGCATCAATA AAGAGATTGG GCTGGAATTT ACCGTAGACG ATTATCACGC AAGCGTCACG
TATTTCCGTA ACGATTATCA GAATAAGATT GTCGCAGGTG ATCAGATTAT TGGCAGAAGC
GCATCTGGCG CTTATGTATT GCAGTGGCAG AACGGCGGTA AAGCGCTGAT TGAAGGTATT
GAAGCCAGCA TGGCTGTTCC GCTGATGCCG GACCGTCTGA ACTGGAATAC CAATGCGACT
TATATGATCA CTTCTGAGCA AAAAGATACC GGTAATCCTT TATCGATAAT CCCGAAATAT
ACGGTGAATA CCTTCCTCGA CTGGACTGTC ACCAGCGCGC TCTCCGCTAA CGTCAACTGG
ACGTTATACG GCAAGCAAAA ACCGCGAACA CATGCGGAGT CGCGTAGTGA AGAGACCAAA
GGATTGTCCG GGAAAGCGCT GGGGGCTTAC TCACTGGTTG GTGCCAACGT TAACTACGAT
ATCAACAAGA ACCTGCGTCT TAATGTCGGT ATCAGCAATA TCTTCGATAA ACAGATCTAT
CGCTCCGCCG AAGGGGCAAA TACCTATAAC GAACCGGGTC GGGCTTATTA TGCCGGTGTG
ACGGCCTCGT TTTGA
 
Protein sequence
MRVKKFIWLI TVVSTGVNSP LSAAESTDDN GETMVVESTV EQVLKQQPGV SIITRDDIQK 
NPPVNDLADI IRKMPGVNLT GNSASGTRGN NRQIDIRGMG PENTLVLIDG VPVTSRNSVR
YSWRGERDTR GDTNWVPPEM VERIEVIRGP AAARYGSGAA GGVVNIITKR PTNDWHGSLS
LYTNQPESSK EGDTRRGNFS LSGPLAGDTL TMRLYGNLNR TDADSWDINS SAGTKNAAGR
EGVTNKDINS VFSWKMTPQQ ILDFEAGYSR QGNIYAGDTQ NSTSNAVTKS LAQSGRETNR
LYRQNYGLTH NGIWDWGQSR LGFYYEKTDN TRMNEGLSGG GEGRITNDQT FTTNRLTSYR
TSGEVNVPVI WLFEQTLTVG AEWNRDELND PSSTSLTVKD SNIAGIPGSA ANRSSKNKSE
ISALYVEDNI EPMAGTNIIP GLRFDYLSES GSNFSPSLNL SQELGEYVKV KAGIARAFKA
PNLYQTSEGY LLYSKGNGCP KDITSGGCYL VGNKNLDPEI SINKEIGLEF TVDDYHASVT
YFRNDYQNKI VAGDQIIGRS ASGAYVLQWQ NGGKALIEGI EASMAVPLMP DRLNWNTNAT
YMITSEQKDT GNPLSIIPKY TVNTFLDWTV TSALSANVNW TLYGKQKPRT HAESRSEETK
GLSGKALGAY SLVGANVNYD INKNLRLNVG ISNIFDKQIY RSAEGANTYN EPGRAYYAGV
TASF