Gene SNSL254_A2862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2862 
Symbol 
ID6486416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp2791477 
End bp2792157 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content55% 
IMG OID642738184 
ProductDTW domain protein 
Protein accessionYP_002041917 
Protein GI194444694 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.277232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.735331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATA ACGCTGTCCT TCAGTTACGC GCCGAACGGC TTGCGCGCGC TACACGCCCT 
TTTCTTGCCA GAGGCAATCG GGTTCGCCGC TGTCAACGCT GCCTGCTGCC GCTAAAATCT 
TGCCTGTGTG ATACGTTAAC GCCTTCTCAG GCGAAAAGCC GTTTTTGTCT GGTCATGTTT 
GACACTGAAC CGATGAAACC CAGCAATACC GGCCGGCTGA TAGCCGATAT TTTGCCGGAT 
ACCGCGGCGT TTCAGTGGTC GCGTACCGAG CCGCCGCAGG CGTTGCTGGA GCTGGTACAG 
CATCCGGATT ATCAGCCGAT AGTGGTCTTT CCTGCGTCCT ACGCCGGCGA AGCGCGCGAG 
GTCATTTCCA CCCCGCCCGC CGGGAAACCG CCGCTGTTTA TCATGCTGGA CGGCACCTGG 
CCCGAAGCAC GTAAAATGTT TCGTAAAAGC CCTTATCTGG ATCATCTGCC GGTCATTTCC 
GTCGATTTAT CGCGTCTTTC CGCTTATCGT CTGCGTGAAA TCCATGCCGA AGGGCAATAT 
TGCACCGCCG AAGTCGCCAT AGCGTTGTTA GATCTGGCGG GAGATACCGA GGCGGCAACC 
AGTTTAGGTG AACATTTTTC CCGTTTTAAA ACGCGCTATC TGGCAGGAAA AACGCAACAT 
CCGGGAAACG TCACAGCATA A
 
Protein sequence
MTNNAVLQLR AERLARATRP FLARGNRVRR CQRCLLPLKS CLCDTLTPSQ AKSRFCLVMF 
DTEPMKPSNT GRLIADILPD TAAFQWSRTE PPQALLELVQ HPDYQPIVVF PASYAGEARE 
VISTPPAGKP PLFIMLDGTW PEARKMFRKS PYLDHLPVIS VDLSRLSAYR LREIHAEGQY 
CTAEVAIALL DLAGDTEAAT SLGEHFSRFK TRYLAGKTQH PGNVTA