Gene SNSL254_A2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2857 
Symbol 
ID6485690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2787588 
End bp2788175 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content52% 
IMG OID642738179 
Productneutral amino-acid efflux protein 
Protein accessionYP_002041912 
Protein GI194443716 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.719199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCGA TGCTTTTAAG CGCTTTCTGG ACTTATACAT TAATCACCGC CCTTACCCCC 
GGCCCTAACA ATATTCTCGC GCTTAGCGCA GCAACTGCAC ATGGTTTTCG GCAGAGTATT
CGTGTACTGG CAGGTATGAG TCTGGGATTT TTGGTCGTCA TGCTGCTGTG CGCCGGGATC
GCGTTTTCCC TTGCGGTTAT CGATCCGGCA ATCATTCATT TGCTCAGTTG GGTGGGGGCT
GCGTATATCC TGTGGCTGGC CTGGAAAATT GCTACCAGTC CAGCGGCGGA TGAGAACGCC
AGACCAAAAC CGGTTGGCTT TTGGGTAAGC TTTGGCCTGC AGTTTGTGAA CGTCAAAATT
ATTCTGTACG GCATTACCGC TCTGTCTACA TTTGTTTTAC CGCAAACGCA GGCGCTGAAT
TGGGTCATCG GCGTCAGTAT ATTGCTGGCA TTGATCGGCA CGTTCGGTAA TGTGTGCTGG
GCGCTGGCGG GACATCTGTT TCAGCGGGCG TTTCGCCATT ATGGTCGCCA GTTAAATATC
ATTCTGGCGT TACTGCTGGT GTACTGCGCG GTGCGGATTT TTTACTGA
 
Protein sequence
MTPMLLSAFW TYTLITALTP GPNNILALSA ATAHGFRQSI RVLAGMSLGF LVVMLLCAGI 
AFSLAVIDPA IIHLLSWVGA AYILWLAWKI ATSPAADENA RPKPVGFWVS FGLQFVNVKI
ILYGITALST FVLPQTQALN WVIGVSILLA LIGTFGNVCW ALAGHLFQRA FRHYGRQLNI
ILALLLVYCA VRIFY