Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2751 |
Symbol | |
ID | 6484838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2689383 |
End bp | 2690369 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642738079 |
Product | high-affinity nickel-transporter |
Protein accession | YP_002041813 |
Protein GI | 194444312 |
COG category | [R] General function prediction only |
COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTAA TTTTTTCTCA ACGCACTCCG GGGCGGCGCT GGCTCTCGCT GTGGCCATTG GCGTTATTCC TGCTGCTGAT GCTGGTTGGC GGTCTGTGGA TGTGGCAGGC CTGGCCGCAG GTGATGTTGA AAAGCGCTCT TTGGCAGCGG GACGTGAATC AGCAGTTGAG CGCGCTGCTT AACGCGGTGG CGACGCATCC TGAGCGGGCG GGCGGATCGT TGCTTCTGCT GAGTTTTATG TATGGCGTGC TTCATGCGCT GGGGCCGGGA CACGGCAAAG TGGTGATCGC GACATGGCTG GCGACGCATC CTTCGAAGCT GAAATCAAGT ATCGTGTTAA CCCTCGCCGC CGCGTTATTA CAGGGGTTCG TGGCTATCGG GTTGGTGGTG GGCGTGCTGA CCGTATTGCA ACTTCCGGCC AGGCAGCTCC ATCTGAGCGG TTTCTGGCTG GAAAAGGGGA GCTATGCGTT AGTTGGCGGG CTGGGCATTT TGCTGTGCTG GCGGGCCATA AAAAGGTTAC GCGCGCTGCT ACGTAAACCT GTCTTTATCG CTTTTACGCC GCGCCATGTT CACCATGAAA AATGCGGCTG CGGACATCAG CATCTACCGA CGCAGGAACA ATTGCATAGC GGCGATGACT GGCGCGCGCG ATTCATGATC GTACTGTCTA TGGGGATGCG GCCCTGTTCC GGCGCGATAA TGGTGCTGTT ATTCAGTAAA GTGATTGGCG TTTTTAGCTG GGGAATGGCG TCGGTACTGG CGATGGCGGC GGGAACCTCG CTAACGATTA CCTCGCTGGC GTTGCTGGTA CACACTTTTC GTGCTCTGGC GGTGAAGCTC AGTGGAAACA AAGCGCCAGC GTTATGGCGG CAGGTAGGCT GGTCAACGCT GGCGCTGGCC GGAGGGGTCA TACTGCTTGT CGCGGCGCTG GTCATGTGGT TTAGCGTGCC GCAGCCTGTG GGCGGGCTGC GGCCATGGCG TGGTTGA
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Protein sequence | MSVIFSQRTP GRRWLSLWPL ALFLLLMLVG GLWMWQAWPQ VMLKSALWQR DVNQQLSALL NAVATHPERA GGSLLLLSFM YGVLHALGPG HGKVVIATWL ATHPSKLKSS IVLTLAAALL QGFVAIGLVV GVLTVLQLPA RQLHLSGFWL EKGSYALVGG LGILLCWRAI KRLRALLRKP VFIAFTPRHV HHEKCGCGHQ HLPTQEQLHS GDDWRARFMI VLSMGMRPCS GAIMVLLFSK VIGVFSWGMA SVLAMAAGTS LTITSLALLV HTFRALAVKL SGNKAPALWR QVGWSTLALA GGVILLVAAL VMWFSVPQPV GGLRPWRG
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