Gene SNSL254_A2751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2751 
Symbol 
ID6484838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2689383 
End bp2690369 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content59% 
IMG OID642738079 
Producthigh-affinity nickel-transporter 
Protein accessionYP_002041813 
Protein GI194444312 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAA TTTTTTCTCA ACGCACTCCG GGGCGGCGCT GGCTCTCGCT GTGGCCATTG 
GCGTTATTCC TGCTGCTGAT GCTGGTTGGC GGTCTGTGGA TGTGGCAGGC CTGGCCGCAG
GTGATGTTGA AAAGCGCTCT TTGGCAGCGG GACGTGAATC AGCAGTTGAG CGCGCTGCTT
AACGCGGTGG CGACGCATCC TGAGCGGGCG GGCGGATCGT TGCTTCTGCT GAGTTTTATG
TATGGCGTGC TTCATGCGCT GGGGCCGGGA CACGGCAAAG TGGTGATCGC GACATGGCTG
GCGACGCATC CTTCGAAGCT GAAATCAAGT ATCGTGTTAA CCCTCGCCGC CGCGTTATTA
CAGGGGTTCG TGGCTATCGG GTTGGTGGTG GGCGTGCTGA CCGTATTGCA ACTTCCGGCC
AGGCAGCTCC ATCTGAGCGG TTTCTGGCTG GAAAAGGGGA GCTATGCGTT AGTTGGCGGG
CTGGGCATTT TGCTGTGCTG GCGGGCCATA AAAAGGTTAC GCGCGCTGCT ACGTAAACCT
GTCTTTATCG CTTTTACGCC GCGCCATGTT CACCATGAAA AATGCGGCTG CGGACATCAG
CATCTACCGA CGCAGGAACA ATTGCATAGC GGCGATGACT GGCGCGCGCG ATTCATGATC
GTACTGTCTA TGGGGATGCG GCCCTGTTCC GGCGCGATAA TGGTGCTGTT ATTCAGTAAA
GTGATTGGCG TTTTTAGCTG GGGAATGGCG TCGGTACTGG CGATGGCGGC GGGAACCTCG
CTAACGATTA CCTCGCTGGC GTTGCTGGTA CACACTTTTC GTGCTCTGGC GGTGAAGCTC
AGTGGAAACA AAGCGCCAGC GTTATGGCGG CAGGTAGGCT GGTCAACGCT GGCGCTGGCC
GGAGGGGTCA TACTGCTTGT CGCGGCGCTG GTCATGTGGT TTAGCGTGCC GCAGCCTGTG
GGCGGGCTGC GGCCATGGCG TGGTTGA
 
Protein sequence
MSVIFSQRTP GRRWLSLWPL ALFLLLMLVG GLWMWQAWPQ VMLKSALWQR DVNQQLSALL 
NAVATHPERA GGSLLLLSFM YGVLHALGPG HGKVVIATWL ATHPSKLKSS IVLTLAAALL
QGFVAIGLVV GVLTVLQLPA RQLHLSGFWL EKGSYALVGG LGILLCWRAI KRLRALLRKP
VFIAFTPRHV HHEKCGCGHQ HLPTQEQLHS GDDWRARFMI VLSMGMRPCS GAIMVLLFSK
VIGVFSWGMA SVLAMAAGTS LTITSLALLV HTFRALAVKL SGNKAPALWR QVGWSTLALA
GGVILLVAAL VMWFSVPQPV GGLRPWRG