| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2745 |
|---|
| Symbol | |
|---|
| ID | 6484505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2683635 |
|---|
| End bp | 2684366 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642738073 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_002041807 |
|---|
| Protein GI | 194442269 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00735302 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 101 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAA ACATTCGAAT TGTGCTGGTG GAAACCTCCC ACACCGGCAA TATGGGCTCC
GTGGCTCGCG CTATGAAAAC CATGGGCTTA ACTAACCTGT GGCTGGTAAA CCCGTTGGTG
AAACCGGACT CCCAGGCCAT CGCCCTGGCG GCAGGCGCCA GCGATGTGAT CGGTAATGCG
CAGATCGTCG ATACGCTGGA CGAAGCGTTG GCTGGCTGTA GCCTGGTGGT CGGCACCAGC
GCCCGTTCCC GCACTCTGCC GTGGCCGATG CTTGATCCGC GCGAGTGCGG CTTAAAAAGC
GTGGCGGAAG CGGCAAATAC GCCGGTTGCG CTGGTTTTTG GTCGTGAGCG TGTCGGGCTG
ACTAACGATG AGTTGCAAAA ATGCCATTAT CACGTCGCTA TTGCCGCTAA CCCGGAGTAC
AGCTCGTTGA ATCTGGCGAT GGCGGTACAG GTCATCGCGT ATGAAGTCCG CATGGCCTGG
CTGGCGACGC AGGAAAACGG CGACGCGGCA GATCATGAAG AGGCGCCGTA TCCGCTGGTG
GACGATCTTG AACGTTTCTA CGGCCATCTG GAGCAGACGT TGCTCTCCAC TGGCTTTATT
CGCGAAAACC ATCCGGGGCA GGTGATGAAT AAATTGCGCC GTCTGTTTAC CCGCGCCCGC
CCGGAAAGCC AGGAGTTGAA TATTCTGCGT GGGATTCTGG CGTCTATTGA GCAGCAGAAT
AAAGGCAAGT AA
|
|---|
| Protein sequence | MLQNIRIVLV ETSHTGNMGS VARAMKTMGL TNLWLVNPLV KPDSQAIALA AGASDVIGNA
QIVDTLDEAL AGCSLVVGTS ARSRTLPWPM LDPRECGLKS VAEAANTPVA LVFGRERVGL
TNDELQKCHY HVAIAANPEY SSLNLAMAVQ VIAYEVRMAW LATQENGDAA DHEEAPYPLV
DDLERFYGHL EQTLLSTGFI RENHPGQVMN KLRRLFTRAR PESQELNILR GILASIEQQN
KGK
|
|---|
| |