Gene SNSL254_A2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2584 
Symbol 
ID6487049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2505025 
End bp2505963 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content47% 
IMG OID642737918 
Productouter membrane protease 
Protein accessionYP_002041658 
Protein GI194442992 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4571] Outer membrane protease 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC ATGCTATTGC AGTAATGATG ATCGCCGTAT TTTCTGAGTC GGTTTATGCG 
GAGTCTGCCT TATTTATTCC GGACGTCTCT CCTGATAGCG TCACGACATC CCTTTCCGTG
GGTGTGTTAA ATGGTAAATC CAGGGAGCTG GTTTATGATA CCGACACCGG GCGGAAGCTG
AGTCAACTGG ACTGGAAAAT AAAAAATGTC GCCACGTTGC AGGGGGATTT ATCATGGGAA
CCCTATTCGT TCATGACGCT GGACGCCCGC GGCTGGACGT CTTTGGCGTC GGGATCGGGT
CATATGGTTG ACCATGACTG GATGAGCAGT GAGCAGCCTG GCTGGACCGA TCGTTCAATT
CATCCGGACA CCAGCGCCAA CTATGCTAAT GAATACGATT TGAATGTGAA AGGTTGGTTA
TTGCAGGGCG ATAACTACAA GGCGGGCGTG ACAGCGGGCT ATCAGGAAAC CCGTTTTAGC
TGGACGGCAA GAGGCGGGTC TTATATTTAT GATAATGGTC GGTATATTGG TAACTTTCCT
CATGGCGTGC GCGGCATAGG TTATAGCCAG CGTTTCGAAA TGCCCTATAT CGGGCTGGCG
GGTGATTATC GTATTAATGA CTTTGAGTGT AATGTACTGT TTAAATACAG CGACTGGGTA
AATGCGCATG ATAATGACGA ACACTACATG CGCAAACTTA CCTTCCGTGA AAAAACGGAA
AATTCACGAT ATTATGGCGC TTCTATTGAC GCCGGATATT ATATTACCAG TAATGCAAAA
ATCTTTGCTG AGTTCGCTTA CAGTAAATAT GAAGAAGGTA AGGGCGGTAC GCAAATCATA
GATAAAACCA GTGGTGATAC GGCGTATTTT GGTGGCGATG CCGCAGGTAT AGCTAATAAT
AACTATACGG TTACCGCGGG GTTGCAGTAC CGCTTCTAG
 
Protein sequence
MKKHAIAVMM IAVFSESVYA ESALFIPDVS PDSVTTSLSV GVLNGKSREL VYDTDTGRKL 
SQLDWKIKNV ATLQGDLSWE PYSFMTLDAR GWTSLASGSG HMVDHDWMSS EQPGWTDRSI
HPDTSANYAN EYDLNVKGWL LQGDNYKAGV TAGYQETRFS WTARGGSYIY DNGRYIGNFP
HGVRGIGYSQ RFEMPYIGLA GDYRINDFEC NVLFKYSDWV NAHDNDEHYM RKLTFREKTE
NSRYYGASID AGYYITSNAK IFAEFAYSKY EEGKGGTQII DKTSGDTAYF GGDAAGIANN
NYTVTAGLQY RF