Gene SNSL254_A2551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2551 
SymbolcvpA 
ID6484582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2474861 
End bp2475349 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content51% 
IMG OID642737886 
Productcolicin V production protein 
Protein accessionYP_002041627 
Protein GI194445133 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTGGA TTGATTACGC CATTATCGCG GTGATTGCTT TTTCCTGTCT GGTTAGCCTG 
ATCCGCGGCT TTGTTCGTGA AGCGTTATCG CTGGTGACGT GGGGTTGTGC TTTCTTTGTC
GCCAGTCACT ACTACACTTA CCTGTCTGTC TGGTTTACGG GCTTTGAAGA CGAACTGGTT
CGTAATGGGA TTGCTATCGC GGTACTGTTT ATCGCGACGC TTATCGTCGG CGCTATCGTG
AATTTTGTGA TAGGTCAGCT AGTAGAAAAG ACCGGCCTGT CGGGAACTGA CCGGGTGTTG
GGGATCTGTT TCGGCGCACT GCGAGGCGCG CTGATTGTCG CCGCCATTCT GTTCTTCCTT
GATACCTTTA CCGGCTTGTC GAAAAGCGAA GACTGGAGCA AATCGCAGCT CATCCCGCAG
TTCAGCTTCA TCATCAGATG GTTCTTTGAC TATCTGCAAA GCTCGTCGAG TTTCTTGCCC
AGGACGTAA
 
Protein sequence
MVWIDYAIIA VIAFSCLVSL IRGFVREALS LVTWGCAFFV ASHYYTYLSV WFTGFEDELV 
RNGIAIAVLF IATLIVGAIV NFVIGQLVEK TGLSGTDRVL GICFGALRGA LIVAAILFFL
DTFTGLSKSE DWSKSQLIPQ FSFIIRWFFD YLQSSSSFLP RT