Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2485 |
Symbol | |
ID | 6486043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2409833 |
End bp | 2410732 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737820 |
Product | polysaccharide deacetylase domain protein |
Protein accession | YP_002041561 |
Protein GI | 194444910 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAG TCGGTTTACG CATTGATGTT GATACCTTGC GAGGAACACG TGAAGGTGTT CCCCGGCTGC TGGCGACATT GCATCGCCAC GGCGTTCAGG CCAGCTTTTT CTTCAGCGTC GGGCCGGACA ATATGGGACG TCATCTTTGG CGTCTGATAA GACCGCGATT TTTATGGAAA ATGCTACGTT CAAACGCCGC CTCGCTCTAC GGTTGGGATA TCCTGCTGGC CGGAACCGCC TGGCCGGGAA AAAATATCGG CAACGCTAAT GCCGGGATCA TTCGTGAAAC GGCAACATAC CATGAGACGG GACTACATGC CTGGGATCAC CATGCGTGGC AGACTCACAG CGGCCACTGG AGTATCCGCC AGCTTGAAGA AGATATTGCG CGCGGCATAA CGGCGCTTGA GGCCATTATC GGAAAACCCG TCACCTGCTC AGCCGCGGCC GGCTGGCGAG CGGATGGGCG CGTTGTTCGT GCGAAGGAGC CGTTCAACCT GCGGTATAAC AGCGATTGCC GTGGAACCAC CTTATTCCGT CCGCTACTGA TGCCGGGCCA GACAGGGACG CCGCAAATCC CGGTCACCTT ACCCACGTGG GATGAGGTTA TCGGCCCCGC CGTTCAGGCG CAGTCGTTCA ATACCTGGAT TATTTCCCGT ATGTTGCAGG ACAAAGGCAC GCCGGTATAT ACCATCCATG CGGAAGTCGA AGGTATTGTC CATCAGCCGC TGTTTGAAGA TTTGCTCGTT CGTGCACGCG ATGCGGGGAT CACCTTTTGT CCTCTGGGCG AACTGCTGCC GGCATCGCCT GAGTCTCTGC CGTTGGGGCA AATTGTACGT GGACACATCC CTGGCCGTGA AGGTTGGCTG GGGTGTCAAC AGGCAGCGAG CGCCTCATGA
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Protein sequence | MTKVGLRIDV DTLRGTREGV PRLLATLHRH GVQASFFFSV GPDNMGRHLW RLIRPRFLWK MLRSNAASLY GWDILLAGTA WPGKNIGNAN AGIIRETATY HETGLHAWDH HAWQTHSGHW SIRQLEEDIA RGITALEAII GKPVTCSAAA GWRADGRVVR AKEPFNLRYN SDCRGTTLFR PLLMPGQTGT PQIPVTLPTW DEVIGPAVQA QSFNTWIISR MLQDKGTPVY TIHAEVEGIV HQPLFEDLLV RARDAGITFC PLGELLPASP ESLPLGQIVR GHIPGREGWL GCQQAASAS
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