Gene SNSL254_A2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2378 
SymbolmglC 
ID6486288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2295162 
End bp2296172 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content52% 
IMG OID642737717 
Productbeta-methylgalactoside transporter inner membrane component 
Protein accessionYP_002041459 
Protein GI194446429 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4211] ABC-type glucose/galactose transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.909919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGT TAAACAAGAA AAGCTTTTTG ACCTGGCTGA AAGAGGGCGG AATTTACGTC 
GTTCTTTTAG TGTTGCTGGC GATTATTATT TTCCAGGACC CGACTTTTTT AAGTTTGCTG
AATTTAAGTA ATATTCTGAC GCAATCTTCG GTACGTATTA TTATCGCGCT GGGCGTGGCG
GGACTCATCG TCACCCAGGG GACAGACCTG TCGGCGGGGC GTCAGGTAGG GCTGGCGGCG
GTCGTGGCGG CAACATTACT GCAATCAATG GAAAACGCCA ACAAAGTGTT TCCGGAAATG
GCGACCATGC CGATTGCTCT GGTCATCCTG ATTGTCTGCG CGATTGGCGC GGTGATTGGC
CTGGTGAACG GCATCATCAT TGCTTACCTG AATGTGACGC CGTTTATTAC CACGCTTGGC
ACGATGATTA TCGTTTATGG AATCAACTCC CTTTACTATG ACTTTGTCGG CGCTTCGCCC
ATTTCCGGCT TTGACAGCGG CTTTTCCACC TTTGCGCAGG GCTTTGTGGC GATGGGCAGT
TTCCGGCTCT CCTACATCAC CTTTTACGCC CTGATTGCGG TAGCGTTTGT CTGGGTGCTG
TGGAATAAGA CCCGCTTTGG TAAAAACATT TTTGCTATTG GCGGCAACCC GGAAGCGGCA
AAAGTTTCTG GCGTAAACGT GGCGCTGAAC CTGCTGATGA TTTATGCGCT CTCCGGCGTG
TTTTATGCCT TCGGCGGCTT ACTGGAAGCA GGGCGTATTG GTTCTGCCAC CAACAACCTC
GGCTTTATGT ATGAACTGGA TGCGATTGCC GCGTGCGTGG TCGGGGGCGT ATCGTTTAGC
GGCGGAGTGG GTACGGTCTT CGGCGTGGTG ACCGGCGTTA TTATCTTTAC CGTCATCAAC
TACGGCCTGA CCTATATCGG GGTAAACCCG TACTGGCAGT ACATTATCAA AGGCGGCATT
ATCATTTTCG CCGTGGCGCT GGACTCGCTG AAATACGCGC GTAAGAAGTA G
 
Protein sequence
MSALNKKSFL TWLKEGGIYV VLLVLLAIII FQDPTFLSLL NLSNILTQSS VRIIIALGVA 
GLIVTQGTDL SAGRQVGLAA VVAATLLQSM ENANKVFPEM ATMPIALVIL IVCAIGAVIG
LVNGIIIAYL NVTPFITTLG TMIIVYGINS LYYDFVGASP ISGFDSGFST FAQGFVAMGS
FRLSYITFYA LIAVAFVWVL WNKTRFGKNI FAIGGNPEAA KVSGVNVALN LLMIYALSGV
FYAFGGLLEA GRIGSATNNL GFMYELDAIA ACVVGGVSFS GGVGTVFGVV TGVIIFTVIN
YGLTYIGVNP YWQYIIKGGI IIFAVALDSL KYARKK