Gene SNSL254_A2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2350 
Symbol 
ID6482654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2267592 
End bp2268323 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content54% 
IMG OID642737690 
ProductMerR family transcriptional regulator 
Protein accessionYP_002041432 
Protein GI194443142 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.749654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTT ACACAATTGG TGAAGTGGCT TTGCTTTGTG ATATCAATCC TGTCACGTTG 
CGCGCGTGGC AGAGACGTTA TGGACTTTTA AAACCACAGC GAACGGATGG CGGTCATCGT
CTGTTTAACG ATGCCGATAT CGACAGAATC CGCGAAATCA AGCGCTGGAT AGATAACGGC
GTCCAGGTCA GCAAAGTCAA AGTGCTGCTC AGTAGCGACA GTAGCGAACA ACCTAACGGC
TGGCGCGAAC AGCAGGAGAT CCTGCTGCAC TACCTGCAAA GCAGTAATCT GCACAGTTTA
CGGTTATGGG TCAAAGAACG CGGTCAGGAT TATCCTGCCC AAACATTGAC CACTAACCTG
TTCGTCCCAC TGCGGCGACG ATTACAGTGC CAACAACCCG CCCTTCAGGC GCTGCTCGGC
ATTCTTGACG GTATCCTGAT CAACTATATT GCGCTCTGCC TGGCGTCTGC GCGTAAGAAA
CAGGGAAAAG ATGCGTTGGT GATCGGCTGG AATATCCATG ATACCACCCG CCTGTGGCTG
GAAGGTTGGG TCGCCAGCCA ACAGGGATGG CGAATCGACG TGTTGGCGCA TTCGCTTAGC
CAGTTCCGCC CGGAACTTTT TGACGGCAAG ACGTTACTGG TATGGTGCGG AGAAAACCAG
ACGCTGGCGC AGCAGCAGCA ACTTTTGGCC TGGCGCGCCC AGGGACACGA CATTCATCCC
CTTGGCGTTT AA
 
Protein sequence
MALYTIGEVA LLCDINPVTL RAWQRRYGLL KPQRTDGGHR LFNDADIDRI REIKRWIDNG 
VQVSKVKVLL SSDSSEQPNG WREQQEILLH YLQSSNLHSL RLWVKERGQD YPAQTLTTNL
FVPLRRRLQC QQPALQALLG ILDGILINYI ALCLASARKK QGKDALVIGW NIHDTTRLWL
EGWVASQQGW RIDVLAHSLS QFRPELFDGK TLLVWCGENQ TLAQQQQLLA WRAQGHDIHP
LGV