| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2340 |
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| Symbol | |
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| ID | 6483867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2257576 |
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| End bp | 2258256 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642737680 |
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| Product | pilus assembly chaperone |
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| Protein accession | YP_002041422 |
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| Protein GI | 194446677 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.854509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGGA TGATTGCATT ATGCCTGGCT TGTGCCGCTA TGCCTGCGTG GAGCGGCATT
TATATATACG GTACACGTAT TATTTATCCG GCGCAGAAAA AAGATATTAC CGTACAATTA
ATGAATGACG GTAAACGAAG TTCACTCATC CAGGCGTGGA TTGATAACGG TGATACCAGC
CTGCCGCCAG AAAAATTACA GGTTCCATTT ATTATGACCC CCCCTGTAAT TAGAGTTGCG
GCAAATTCAG GTCAGCAATT AAAAATAAAG AAGCTCGCTA ATAACTTGCC TGGCGATCGT
GAAAGTCTTT TCTACCTCAA TGTATTGGAT ATTCCACCAA ATTCAGACGA GAACAAAGAT
AAAAATATCA TTAAATTTGC GCTACAAAAC CGGATAAAGT TGATCTATCG CCCACCGGGG
ATACAGAAAG TTGATAAAGC GACATTTTCC CGCTTGCAGT TGCTTCGTGC GCCAGGGAGT
ATTAGCGTGA AAAATAATTC CGCAAACTGG ATCACTATTC CAGAAGTTAA AGCAAAAAGT
AAAGTAAATA AAGAAACATT GTTACTGGCT CCATGGTCAT CGCAGAGTAT CACCACAACG
GTAGTCGTAA ATAGCTATAC CGTGACGTTA ATTGATGATT CTGGTAATTA TTTAAACGAG
ACTATCAAAA TAGAAAATTA A
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| Protein sequence | MKWMIALCLA CAAMPAWSGI YIYGTRIIYP AQKKDITVQL MNDGKRSSLI QAWIDNGDTS
LPPEKLQVPF IMTPPVIRVA ANSGQQLKIK KLANNLPGDR ESLFYLNVLD IPPNSDENKD
KNIIKFALQN RIKLIYRPPG IQKVDKATFS RLQLLRAPGS ISVKNNSANW ITIPEVKAKS
KVNKETLLLA PWSSQSITTT VVVNSYTVTL IDDSGNYLNE TIKIEN
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