Gene SNSL254_A2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2296 
Symbol 
ID6482636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2208890 
End bp2209378 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content56% 
IMG OID642737642 
Productputative colanic acid biosynthesis acetyltransferase WcaB 
Protein accessionYP_002041384 
Protein GI194442980 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0186762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.151552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAG ACTTACGCGC GAATAGCTGG AGCTTACGCC CCTGTTGCAT GGTGCTGGCC 
TACCGTATCG CTCATTTTTG TTCCGTCTGG CGCAAAAAGA ATGTGCTGAA TAATCTGTGG
GCCGCGCCGG TGCTGGTGCT GTATCGCGTG ATCACGGAAT GCCTGTTCGG GTATGAAATC
CAGGCCGCCG CGACCATTGG TCGGCGGTTC ACTATCCATC ATGGTTACGC GGTAGTGATC
AACAAACATG TCGTCGCCGG CGACGATTTT ACCATTCGCC ACGGCGTCAC CATTGGCAAT
CGCGGCGCGG ACAGCCTGGC TTGTCCGGTG ATTGGTAACG GCGTTGAGCT GGGGGCGAAT
GTCATCCTGC TTGGCGATAT TACTATCGGT AATCACGTCA CGATTGGCGC GGGTAGCGTG
GTGCTTGACA GTATTCCGGA CCATGCGCTG GTGGTGGGAG AAAAAGCACG GGTGAAGGTC
AGCACATGA
 
Protein sequence
MLEDLRANSW SLRPCCMVLA YRIAHFCSVW RKKNVLNNLW AAPVLVLYRV ITECLFGYEI 
QAAATIGRRF TIHHGYAVVI NKHVVAGDDF TIRHGVTIGN RGADSLACPV IGNGVELGAN
VILLGDITIG NHVTIGAGSV VLDSIPDHAL VVGEKARVKV ST