Gene SNSL254_A2261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2261 
Symbol 
ID6486525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2169633 
End bp2171063 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content38% 
IMG OID642737608 
Productundecaprenyl-phosphate galactose phosphotransferase 
Protein accessionYP_002041350 
Protein GI194445954 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0072659 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCGTT TTGATAATAA GTATAACCCA AATTTATGCA AAATATTATT GGCTATATCA 
GATTTACTGT TTTTTAATGT AGCCTTATGG GCATCGTTAG GAGTTGTATA TTTAATCTTT
GATGAAGTTC AGCGATTTGT ACCACAAGAG CAATTAGATA ATCGATTTAT ATCACATTTT
ATTCTATCTA TAGTATGCGT TGGATGGTTT TGGGTTCGAC TGCGTCACTA TACATATCGA
AAGCCATTCT GGTATGAGTT GAAAGAGGTT ATTCGTACTA TCGTTATTTT TGCTGTGTTT
GATTTGGCTT TAATTGCGTT TACAAAATGG CAGTTTTCAC GCTATGTCTG GGTGTTTTGT
TGGACTTTTG CCATAATCCT GGTGCCTTTT TTTCGCGCAC TTACAAAGCA TTTATTGAAC
AAGCTAGGTA TCTGGAAGAA AAAAACTATC ATCCTGGGGA GCGGACAGAA TGCTCGTGGT
GCATATTCTG CGCTGCAAAG TGAGGAGATG ATGGGGTTTG ATGTTATCGC TTTTTTTGAT
ACGGATGCGT CAGATGCTGA AATAAATATG TTGCCGGTGA TAAAGGACAC TGAGACTATT
TGGGATTTAA ATCGTACAGG TGATGTCCAT TATATCCTTG CTTATGAATA CACCGAGTTG
GAGAAAACAC ATTTTTGGCT ACGTGAACTT TCAAAACATC ATTGTCGTTC TGTTACTGTC
GTCCCCTCGT TTAGAGGATT GCCATTATAT AATACTGATA TGTCTTTTAT CTTTAGCCAT
GAAGTTATGT TATTAAGGAT ACAAAATAAC TTGGCTAAAA GGTCGTCCCG TTTTCTCAAA
CGGACATTTG ATATTGTTTG TTCAATAATG ATTCTTATAA TTGCATCACC ACTTATGATT
TATCTGTGGT ATAAAGTTAC TCGAGATGGT GGTCCGGCTA TTTATGGTCA CCAGCGAGTA
GGTCGGCATG GAAAACTTTT TCCATGCTAC AAATTTCGTT CTATGGTTAT GAATTCTCAA
GAGGTACTAA AAGAACTTTT GGCTAACGAT CCTATTGCCA GGGCTGAATG GGAAAAAGAT
TTTAAACTGA AAAATGATCC TCGAATCACA GCTGTAGGTC GATTTATACG TAAAACTAGC
CTTGATGAGT TGCCACAACT TTTTAATGTA CTAAAAGGTG ATATGAGCCT GGTTGGACCA
CGACCTATCG TTTCGGATGA ACTGGAGCGT TATTGTGATG ATGTTGATTA TTATTTGATG
GCAAAGCCGG GCATGACAGG TCTATGGCAA GTGAGTGGGC GTAATGATGT TGATTATGAC
ACTCGTGTTT ATTTTGATTC CTGGTATGTT AAAAACTGGA CGCTTTGGAA TGATATTGCC
ATTCTGTTTA AAACAGCGAA AGTTGTTTTG CGGCGAGATG GTGCGTATTA A
 
Protein sequence
MDRFDNKYNP NLCKILLAIS DLLFFNVALW ASLGVVYLIF DEVQRFVPQE QLDNRFISHF 
ILSIVCVGWF WVRLRHYTYR KPFWYELKEV IRTIVIFAVF DLALIAFTKW QFSRYVWVFC
WTFAIILVPF FRALTKHLLN KLGIWKKKTI ILGSGQNARG AYSALQSEEM MGFDVIAFFD
TDASDAEINM LPVIKDTETI WDLNRTGDVH YILAYEYTEL EKTHFWLREL SKHHCRSVTV
VPSFRGLPLY NTDMSFIFSH EVMLLRIQNN LAKRSSRFLK RTFDIVCSIM ILIIASPLMI
YLWYKVTRDG GPAIYGHQRV GRHGKLFPCY KFRSMVMNSQ EVLKELLAND PIARAEWEKD
FKLKNDPRIT AVGRFIRKTS LDELPQLFNV LKGDMSLVGP RPIVSDELER YCDDVDYYLM
AKPGMTGLWQ VSGRNDVDYD TRVYFDSWYV KNWTLWNDIA ILFKTAKVVL RRDGAY