Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2261 |
Symbol | |
ID | 6486525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2169633 |
End bp | 2171063 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642737608 |
Product | undecaprenyl-phosphate galactose phosphotransferase |
Protein accession | YP_002041350 |
Protein GI | 194445954 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.0072659 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGATCGTT TTGATAATAA GTATAACCCA AATTTATGCA AAATATTATT GGCTATATCA GATTTACTGT TTTTTAATGT AGCCTTATGG GCATCGTTAG GAGTTGTATA TTTAATCTTT GATGAAGTTC AGCGATTTGT ACCACAAGAG CAATTAGATA ATCGATTTAT ATCACATTTT ATTCTATCTA TAGTATGCGT TGGATGGTTT TGGGTTCGAC TGCGTCACTA TACATATCGA AAGCCATTCT GGTATGAGTT GAAAGAGGTT ATTCGTACTA TCGTTATTTT TGCTGTGTTT GATTTGGCTT TAATTGCGTT TACAAAATGG CAGTTTTCAC GCTATGTCTG GGTGTTTTGT TGGACTTTTG CCATAATCCT GGTGCCTTTT TTTCGCGCAC TTACAAAGCA TTTATTGAAC AAGCTAGGTA TCTGGAAGAA AAAAACTATC ATCCTGGGGA GCGGACAGAA TGCTCGTGGT GCATATTCTG CGCTGCAAAG TGAGGAGATG ATGGGGTTTG ATGTTATCGC TTTTTTTGAT ACGGATGCGT CAGATGCTGA AATAAATATG TTGCCGGTGA TAAAGGACAC TGAGACTATT TGGGATTTAA ATCGTACAGG TGATGTCCAT TATATCCTTG CTTATGAATA CACCGAGTTG GAGAAAACAC ATTTTTGGCT ACGTGAACTT TCAAAACATC ATTGTCGTTC TGTTACTGTC GTCCCCTCGT TTAGAGGATT GCCATTATAT AATACTGATA TGTCTTTTAT CTTTAGCCAT GAAGTTATGT TATTAAGGAT ACAAAATAAC TTGGCTAAAA GGTCGTCCCG TTTTCTCAAA CGGACATTTG ATATTGTTTG TTCAATAATG ATTCTTATAA TTGCATCACC ACTTATGATT TATCTGTGGT ATAAAGTTAC TCGAGATGGT GGTCCGGCTA TTTATGGTCA CCAGCGAGTA GGTCGGCATG GAAAACTTTT TCCATGCTAC AAATTTCGTT CTATGGTTAT GAATTCTCAA GAGGTACTAA AAGAACTTTT GGCTAACGAT CCTATTGCCA GGGCTGAATG GGAAAAAGAT TTTAAACTGA AAAATGATCC TCGAATCACA GCTGTAGGTC GATTTATACG TAAAACTAGC CTTGATGAGT TGCCACAACT TTTTAATGTA CTAAAAGGTG ATATGAGCCT GGTTGGACCA CGACCTATCG TTTCGGATGA ACTGGAGCGT TATTGTGATG ATGTTGATTA TTATTTGATG GCAAAGCCGG GCATGACAGG TCTATGGCAA GTGAGTGGGC GTAATGATGT TGATTATGAC ACTCGTGTTT ATTTTGATTC CTGGTATGTT AAAAACTGGA CGCTTTGGAA TGATATTGCC ATTCTGTTTA AAACAGCGAA AGTTGTTTTG CGGCGAGATG GTGCGTATTA A
|
Protein sequence | MDRFDNKYNP NLCKILLAIS DLLFFNVALW ASLGVVYLIF DEVQRFVPQE QLDNRFISHF ILSIVCVGWF WVRLRHYTYR KPFWYELKEV IRTIVIFAVF DLALIAFTKW QFSRYVWVFC WTFAIILVPF FRALTKHLLN KLGIWKKKTI ILGSGQNARG AYSALQSEEM MGFDVIAFFD TDASDAEINM LPVIKDTETI WDLNRTGDVH YILAYEYTEL EKTHFWLREL SKHHCRSVTV VPSFRGLPLY NTDMSFIFSH EVMLLRIQNN LAKRSSRFLK RTFDIVCSIM ILIIASPLMI YLWYKVTRDG GPAIYGHQRV GRHGKLFPCY KFRSMVMNSQ EVLKELLAND PIARAEWEKD FKLKNDPRIT AVGRFIRKTS LDELPQLFNV LKGDMSLVGP RPIVSDELER YCDDVDYYLM AKPGMTGLWQ VSGRNDVDYD TRVYFDSWYV KNWTLWNDIA ILFKTAKVVL RRDGAY
|
| |