Gene SNSL254_A2036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2036 
Symbol 
ID6483675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1976013 
End bp1976669 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content53% 
IMG OID642737392 
Productcarbon-nitrogen family hydrolase 
Protein accessionYP_002041142 
Protein GI194443553 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.0891243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCT GGAAAATTGC TGCTGCGCAG TATGCGCCCC TGAACGCCTC GCCGGCGGAG 
CATGTCGCCC ATCATCTGGA ATATATTGAG CTTGCGGCTC GTCAACAGTG CGAACTGCTG
GTCTTTCCGT CGCTGTCGCT ATTAGGCTGC GACGAAAGAA ATAAACCGTT GCCCGCCCCG
CCTGACGAGG CGCTTTTACA GCCGCTCACT CATGCGGCCG ATACCCACCA TATGACTATC
ATTGTGGGTA TGCCTGTTGA GCATAACTGC CGCTTCGTAA AAGGCATCGC TATTTTTGCC
CCATGGCTAA CGTCGCCGCT CATGTTTCAC AAAAGTCATG GCGCCTGTAT TGCCAGGCAG
CGAAGCGCTA TCAACGTGGT GGATGAGCAG CCAGAAGGTG GTGATATAGA TCCCTCATTT
ACGTTATTCA CAACCAGTCA ATGTCTTAAC GAACCTGAAC TCCATGCTTC TACCTCACGC
TTACAACGTT TTTCGCATAA ATATGCGCTG GCCGTACTGA TGGCCAATGC CTGTGGCAGT
AGCGCTCTGT GGGATGAAAG CGGGCAACTT ATTGTTCGTG CCGATTGCGG TTCGCTATTA
CTGACGGGCC TGCGCACAAC CGAGGGTTGG CAAGGCGATA TCATTCCATT ACGCTAA
 
Protein sequence
MSSWKIAAAQ YAPLNASPAE HVAHHLEYIE LAARQQCELL VFPSLSLLGC DERNKPLPAP 
PDEALLQPLT HAADTHHMTI IVGMPVEHNC RFVKGIAIFA PWLTSPLMFH KSHGACIARQ
RSAINVVDEQ PEGGDIDPSF TLFTTSQCLN EPELHASTSR LQRFSHKYAL AVLMANACGS
SALWDESGQL IVRADCGSLL LTGLRTTEGW QGDIIPLR