Gene SNSL254_A1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1863 
Symbol 
ID6482983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1827157 
End bp1827549 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content55% 
IMG OID642737237 
Productacyl-CoA thioester hydrolase 
Protein accessionYP_002040989 
Protein GI194442286 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.472639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATA CTCCTCAGGG CGAGCTGGTT TTACGTACAT TGGCCATGCC TGCCGATACC 
AATGCGAACG GCGATATTTT TGGCGGCTGG CTGATGTCGC AAATGGATAT TGGCGGCGCG
ATACTGGCCA AAGAGATCGC GCACGGTCGG GTTGTAACCG TACGCGTGGA AGGAATGACA
TTTCTGCGCC CCGTCGCGGT TGGCGATGTC GTATGCTGCT ACGCGCGCTG CGTTAAACGC
GGTACGACGT CTATTAGCAT CAATATTGAA GTCTGGGTGA AAAAAGTCGC GTCAGAACCG
ATTGGACAGC GCTACAAGGC CACCGAGGCG CTGTTTATTT ATGTTGCCGT CGATCCGGAC
GGTAAACCTC GCCCGCTCCC GGTTCAGGGT TAA
 
Protein sequence
MDNTPQGELV LRTLAMPADT NANGDIFGGW LMSQMDIGGA ILAKEIAHGR VVTVRVEGMT 
FLRPVAVGDV VCCYARCVKR GTTSISINIE VWVKKVASEP IGQRYKATEA LFIYVAVDPD
GKPRPLPVQG