| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1817 |
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| Symbol | sapB |
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| ID | 6483720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1781680 |
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| End bp | 1782645 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642737193 |
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| Product | peptide ABC transporter permease protein SapB |
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| Protein accession | YP_002040945 |
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| Protein GI | 194443603 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00000000000118428 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTATCT TCACCCTGCG TCGGTTATTG CTGTTGCTGG TGACGCTCTT CTTCCTGACC
TTTATCGGCT TTAGCCTGAG CTATTTTACG CCGCATGCGC CGCTACAAGG CGCATCATTA
TGGAATGCCT GGGTTTTCTG GTTCAACGGT CTGCTGCACT GGGACTTTGG CGTGTCCAGC
ATTAACGGCC AGCTGATCTC CGAACAGCTT AAAGAGGTGT TTCCCGCCAC GATGGAGCTG
TGCATTCTCG CCTTTGGTTT TGCGCTGATG GTCGGCATCC CGGTCGGGAT GCTGGCGGGC
GTGACGCGTA GCAAATGGCC GGATCGTTTT ATCAGCGCGC TGGCACTATT AGGTTTCTCA
ATTCCGGTTT TCTGGCTGGC GCTTCTGCTC ACACTGTTCT TTTCGCTCAC GCTGGGGTGG
CTGCCGGTAT CCGGGCGATT TGACCTGCTT TATGAAGTTA AACCGGTTAC CGGTTTCGCC
ATCATTGACG CCTGGATTTC AGATTCGCCA TGGCGTGATG AAATGGTGAT GAGCGCCATA
CGGCATATGG TTTTACCGGT GCTCACGCTC TCCGTCGCGC CGACCACAGA AGTGATCCGC
CTGATGCGAA TCAGCACTAT TGAGGTCTAC GATCAGAACT ACGTTAAAGC GGCGGCCACG
CGCGGCTTAT CGCGCTTTAC GATTTTACGC CGTCACGTGT TGCATAATGC GCTGCCGCCG
GTCATTCCCC GTCTTGGTCT GCAGTTTTCA ACCATGTTAA CGCTGGCGAT GATTACCGAA
ATGGTTTTCA GCTGGCCAGG GCTGGGACGA TGGTTAATTC ACGCCATTCG TCAGCAGGAC
TATGCCGCTA TTTCCGCTGG CGTGATGGTC ATTGGGTCGC TGGTTATTGT GGTCAATGTG
ATTTCCGATA TTTTGGGTGC TATGGCTAAC CCTCTGAAAC ATAAGGAATG GTATGCCTTA
CGATAG
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| Protein sequence | MIIFTLRRLL LLLVTLFFLT FIGFSLSYFT PHAPLQGASL WNAWVFWFNG LLHWDFGVSS
INGQLISEQL KEVFPATMEL CILAFGFALM VGIPVGMLAG VTRSKWPDRF ISALALLGFS
IPVFWLALLL TLFFSLTLGW LPVSGRFDLL YEVKPVTGFA IIDAWISDSP WRDEMVMSAI
RHMVLPVLTL SVAPTTEVIR LMRISTIEVY DQNYVKAAAT RGLSRFTILR RHVLHNALPP
VIPRLGLQFS TMLTLAMITE MVFSWPGLGR WLIHAIRQQD YAAISAGVMV IGSLVIVVNV
ISDILGAMAN PLKHKEWYAL R
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