19 homologs were found in PanDaTox collection
for query gene SNSL254_A1811 on replicon NC_011080
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011080  SNSL254_A1811  peripheral inner membrane phage-shock protein  100 
 
 
72 aa  141  3e-33  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.00000275672 
 
 
-
 
NC_011205  SeD_A1645  peripheral inner membrane phage-shock protein  98.61 
 
 
72 aa  140  7e-33  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000519347 
 
 
-
 
NC_011083  SeHA_C1873  peripheral inner membrane phage-shock protein  97.22 
 
 
72 aa  138  1.9999999999999998e-32  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.00958993 
 
 
-
 
NC_011094  SeSA_A1812  peripheral inner membrane phage-shock protein  95.83 
 
 
72 aa  137  7e-32  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.195745 
 
 
-
 
NC_011149  SeAg_B1463  peripheral inner membrane phage-shock protein  95.83 
 
 
72 aa  136  1e-31  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.148623  n/a   
 
 
-
 
NC_010468  EcolC_2318  peripheral inner membrane phage-shock protein  84.72 
 
 
73 aa  126  1.0000000000000001e-28  Escherichia coli ATCC 8739  Bacteria  decreased coverage  0.00493447  normal 
 
 
-
 
NC_012892  B21_01295  hypothetical protein  84.72 
 
 
73 aa  126  1.0000000000000001e-28  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1949  peripheral inner membrane phage-shock protein  84.72 
 
 
73 aa  126  1.0000000000000001e-28  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_1815  peripheral inner membrane phage-shock protein  84.72 
 
 
73 aa  126  1.0000000000000001e-28  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.303275 
 
 
-
 
CP001509  ECD_01284  peripheral inner membrane phage-shock protein  84.72 
 
 
73 aa  126  1.0000000000000001e-28  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1517  peripheral inner membrane phage-shock protein  84.72 
 
 
73 aa  126  1.0000000000000001e-28  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1422  peripheral inner membrane phage-shock protein  84.72 
 
 
73 aa  126  1.0000000000000001e-28  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2339  phage shock protein PspD  84.72 
 
 
73 aa  126  1.0000000000000001e-28  Escherichia coli DH1  Bacteria  hitchhiker  0.00209124  n/a   
 
 
-
 
NC_010658  SbBS512_E1543  peripheral inner membrane phage-shock protein  83.33 
 
 
73 aa  122  1e-27  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2166  peripheral inner membrane phage-shock protein  70.42 
 
 
73 aa  108  3e-23  Enterobacter sp. 638  Bacteria  normal  normal  0.0755267 
 
 
-
 
NC_009832  Spro_2621  peripheral inner membrane phage-shock protein  44.64 
 
 
87 aa  59.3  0.00000002  Serratia proteamaculans 568  Bacteria  normal  0.335736  normal  0.449425 
 
 
-
 
NC_010465  YPK_1897  peripheral inner membrane phage-shock protein  41.18 
 
 
80 aa  44.3  0.0006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.660254  n/a   
 
 
-
 
NC_009708  YpsIP31758_1789  peripheral inner membrane phage-shock protein  41.18 
 
 
80 aa  44.3  0.0006  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2534  peripheral inner membrane phage-shock protein  44.44 
 
 
59 aa  42.4  0.002  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
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