Gene SNSL254_A1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1811 
SymbolpspD 
ID6486512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1777219 
End bp1777437 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content57% 
IMG OID642737187 
Productperipheral inner membrane phage-shock protein 
Protein accessionYP_002040939 
Protein GI194445768 
COG category 
COG ID 
TIGRFAM ID[TIGR02979] phage shock protein PspD 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.00000275672 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATACTC GCTGGCAACG CGTCGGGCAG AAGGTGAAGC CCGGCTTCAA AATAGCAGGT 
AAGCTGGTTC TGTTGACCGC GTTACGCTAC GGGCCTGCCG GCGTGGCGGG ATGGGCGGTA 
AAATCCGTCG CCCGTCGTCC GCTAAAAATG TTGCTGGCGT TTGCGCTGGA GCCAGTACTT 
CGTAAGGCGG CGAATAAAAT TTCGCGGCGT TACAAATAG
 
Protein sequence
MNTRWQRVGQ KVKPGFKIAG KLVLLTALRY GPAGVAGWAV KSVARRPLKM LLAFALEPVL 
RKAANKISRR YK