Gene SNSL254_A1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1802 
Symbol 
ID6484657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1767327 
End bp1768256 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content53% 
IMG OID642737178 
Productisoflavone reductase 
Protein accessionYP_002040930 
Protein GI194444284 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.205397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0109972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT CCAATAATCA GGTAGGTGAA AAAGTATTGG TGCTGGGTGC GGGACAACTG 
GGGGCGTCAG TGCTGGCGTC GTTGGTTCCG GCGGTCACAC AGCGTAATGG TTCCGTTAGC
GTTATTGTGT CAGGGCGATC CAGGGATAAA CAGAGCAAAC GACGTTCCAG CATTCATCAA
CAACTGGCAG ATGCCGGTGC GCGGTTTATC CCGGTCGACA TCGCAGGCAG TTCGGTTGCA
GCGTTAAAAG ATCAATTCCA CGGTTTTGAT ACGATCATCA ATTGTATGGG GTTTGTCGCC
GGTGCGGGTA CCCAGATAAA AATCACCCGC GCGGTACTGG AGGCGGGCGT TAAGCGCTAT
TTCCCCTGGC AGTTTGGCGT GAATTACGAT GTGGTCGGCA AAGGCAGCGG CCAGCCGGTG
TGGGACGAAC AGTATGACGT CAGGACGCTT TTGCGCGAGC AAAACGTCAC AGAGTGGGTG
ATTGTTTCAA CCGGTTTATT TACCTCTTTT CTCTTCGAAC CGGCCTTTGA TGTGGTCAAC
TTAGACCAAA AAACCATCAA TGCCCTCGGC GGATGGGAAA GGCAGGTCAC CGTCACGTCG
CCTGCGGATA TTGGTCGCCT GACCACTGAA ATTTATCTGC ATCAGCCGCG TATCACTAAC
GAAGTCGTCT TTGTCGCGGG GGAAACGACC TCTTATGCAA AACTGGCGGA AACGGTCGAA
CGCGTGACGC AGCAAACCTT TACCCGAGGC GTATTGACGC TACCTGACTT ACAGGAGCAG
CTCCGTTTAC ATCCGCATAA CCCAATGCTG CGCTATCGCG TCGCCTTCGC GCGTGGTGAC
GGTATGTGGT GGCCGATGAG TGACACCTGG AATGCACAAC ATCATCTGCC GACACAGGAT
ATTGCCGCCT GGCTGAAAAC ACAGCAATGA
 
Protein sequence
MKQSNNQVGE KVLVLGAGQL GASVLASLVP AVTQRNGSVS VIVSGRSRDK QSKRRSSIHQ 
QLADAGARFI PVDIAGSSVA ALKDQFHGFD TIINCMGFVA GAGTQIKITR AVLEAGVKRY
FPWQFGVNYD VVGKGSGQPV WDEQYDVRTL LREQNVTEWV IVSTGLFTSF LFEPAFDVVN
LDQKTINALG GWERQVTVTS PADIGRLTTE IYLHQPRITN EVVFVAGETT SYAKLAETVE
RVTQQTFTRG VLTLPDLQEQ LRLHPHNPML RYRVAFARGD GMWWPMSDTW NAQHHLPTQD
IAAWLKTQQ