Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1802 |
Symbol | |
ID | 6484657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1767327 |
End bp | 1768256 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642737178 |
Product | isoflavone reductase |
Protein accession | YP_002040930 |
Protein GI | 194444284 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.205397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.0109972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACAAT CCAATAATCA GGTAGGTGAA AAAGTATTGG TGCTGGGTGC GGGACAACTG GGGGCGTCAG TGCTGGCGTC GTTGGTTCCG GCGGTCACAC AGCGTAATGG TTCCGTTAGC GTTATTGTGT CAGGGCGATC CAGGGATAAA CAGAGCAAAC GACGTTCCAG CATTCATCAA CAACTGGCAG ATGCCGGTGC GCGGTTTATC CCGGTCGACA TCGCAGGCAG TTCGGTTGCA GCGTTAAAAG ATCAATTCCA CGGTTTTGAT ACGATCATCA ATTGTATGGG GTTTGTCGCC GGTGCGGGTA CCCAGATAAA AATCACCCGC GCGGTACTGG AGGCGGGCGT TAAGCGCTAT TTCCCCTGGC AGTTTGGCGT GAATTACGAT GTGGTCGGCA AAGGCAGCGG CCAGCCGGTG TGGGACGAAC AGTATGACGT CAGGACGCTT TTGCGCGAGC AAAACGTCAC AGAGTGGGTG ATTGTTTCAA CCGGTTTATT TACCTCTTTT CTCTTCGAAC CGGCCTTTGA TGTGGTCAAC TTAGACCAAA AAACCATCAA TGCCCTCGGC GGATGGGAAA GGCAGGTCAC CGTCACGTCG CCTGCGGATA TTGGTCGCCT GACCACTGAA ATTTATCTGC ATCAGCCGCG TATCACTAAC GAAGTCGTCT TTGTCGCGGG GGAAACGACC TCTTATGCAA AACTGGCGGA AACGGTCGAA CGCGTGACGC AGCAAACCTT TACCCGAGGC GTATTGACGC TACCTGACTT ACAGGAGCAG CTCCGTTTAC ATCCGCATAA CCCAATGCTG CGCTATCGCG TCGCCTTCGC GCGTGGTGAC GGTATGTGGT GGCCGATGAG TGACACCTGG AATGCACAAC ATCATCTGCC GACACAGGAT ATTGCCGCCT GGCTGAAAAC ACAGCAATGA
|
Protein sequence | MKQSNNQVGE KVLVLGAGQL GASVLASLVP AVTQRNGSVS VIVSGRSRDK QSKRRSSIHQ QLADAGARFI PVDIAGSSVA ALKDQFHGFD TIINCMGFVA GAGTQIKITR AVLEAGVKRY FPWQFGVNYD VVGKGSGQPV WDEQYDVRTL LREQNVTEWV IVSTGLFTSF LFEPAFDVVN LDQKTINALG GWERQVTVTS PADIGRLTTE IYLHQPRITN EVVFVAGETT SYAKLAETVE RVTQQTFTRG VLTLPDLQEQ LRLHPHNPML RYRVAFARGD GMWWPMSDTW NAQHHLPTQD IAAWLKTQQ
|
| |