Gene SNSL254_A1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1766 
Symbol 
ID6484150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1737936 
End bp1738202 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content57% 
IMG OID642737145 
Productputative cytoplasmic protein 
Protein accessionYP_002040897 
Protein GI194444456 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0575913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAG CGTTTTGGGT GGGATGTGCC GCGTTATTAT TATCGGCTTG CAGTAGCGAA 
CCTGTTCAGC AGGCAACCGC GGCGCATGTT TCGCCAGGGA TGAAAGCGGC GATGTCCAGC
GCCGGCGAAG CGAATTGCGC TATGATTGGC GGTTCGCTTT CAGCGGCCCG GCAGCTTGAT
GGTTCAGTAA TTGGTATGTG CGCGCTACCC AACGGCAAAC GTTGTAGCGA ACAGTCGCTT
GCCGCCGGAA ACTGCGGGAG TTATTAA
 
Protein sequence
MRAAFWVGCA ALLLSACSSE PVQQATAAHV SPGMKAAMSS AGEANCAMIG GSLSAARQLD 
GSVIGMCALP NGKRCSEQSL AAGNCGSY