Gene SNSL254_A1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1753 
Symbol 
ID6486847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1723229 
End bp1724779 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content45% 
IMG OID642737133 
Producthypothetical protein 
Protein accessionYP_002040885 
Protein GI194444806 
COG category[S] Function unknown 
COG ID[COG5305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.125234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTAC CACAACTATC AATATGGCAG CCCGGCGATG GGTTAAGAAA AATAAAGTAT 
AAATATCATG TTTGTCTCAT TGTCATATTC TCCGTCCTTA TACGGTTGCT GTTTTTAACT 
GACCGCTACC TTTGGTGTGA CGAAGCGTCC AGCGTGCTGA TTAGTCGACA TAGCGTAGAT 
AATCTGCTCT TCCATGCCGC TTTTGACGTG CATCCTCCGC TTTATTATCT GTTACTGCAT 
GACTGGATGA TATTATGGGG TGATAGCATT GCAGCGGTAC GCTCTCTCAG TCTACTCTTT 
GGGATCCTGA CAGTTGTGCT GGTTATCGCG CTTACGCGAT GGCTGGCAAA TGAACGTACA 
GCCTTATTGG CGGGATGGTT CGCCGCCCTG ATGCCGATGG CAGTCCATTA CAGTCAAGAA 
ACGCGCATGT ACGCGTTAAT GGGAATGCTA ACGCTCGCTG CCGCGTTAGC ATTGATGATG 
TGGATAAAAA CACCCACCCA TAATCGCTAT CTTGTCGCGT ATGCTTTACT TATGACGTTC 
AGCTTTTACA CCCATTATTT CACCCTATTT ACACTTATTG CCCACTGGAT CGCAGTAACA 
ATATTATCCT GCCAAAGCCA TAAAACGGCC TGCTACCTTA AACTTCCTGG CTGGTGGTTT 
GCTAACCTGG CGATTACTGT CGCTTATCTC CCCTGGTTGC CCGTATTGTT TAATTTACTG 
ACTCATCTGG CGCAGTTGAG AGCCGGTAAT GATATCGGTT GGATTCCCCC CGTAACATGG 
CGTGACCTGC CTGCGATGTA CTGGCATTTT TTTACCGGAA ACAACGGACA GGGTTTTCCG 
TCGTTCATTC TGTGGCTGGC TGTAGGAGGT TTTATCGGTA CTGTGGGGCG AATATCTTTA 
TGCAACGGAG AATATGAAAG ATATCAGCTG ATATTATTTT GTAATCTGGT CATCCCTGTA 
ATGCTGGTCT TCATCATTTC CTGGTGGATG CCGTTATTTA TCGATCGTTA TTTCTTCTTC 
TCATCGCTGA GCATTCCTCC CCTGCTCGCG GTATTACTTA CCCGCGCAAA AAAAGCGGTT 
TGTGGCTTCT GGTTTATCTT ATTCACCTTA TTATTCGGCT ATGGTTCATA TCATAATAAC 
CCTGAGCACA TAGACGAGTT TAAACCACTG GTAAACTATA TTAATACCCG TCACCAGCCT 
AATGATGCCG TGGTAGTCAG TAAAATGTTC GATTATTTAA GTTATGTGTA TTATAATAAG 
CGAGATTATC GTACGTTTCT TTATACACCG CCTAACGCTC ATGGAACATC AGGCAGACCG 
AATGCCTATG GCTTTGGTTC ACTGTTTTAT GCGCAAGCCG ATCAGACATA TATTGATACT 
CTGACAACGC TTTCAAAAAG TTACCATCGT GTCTGGTTGG TAAGCGGCGG TAACTTTAGT 
CAGGATTATC CCTTGCCGTC AGAATGGCAA AATATCGCAA ACTTCAGAAG TGGTAGATTT 
CAGGTACAGT TATTTGTAAT ACCGACTCAA CAGGCGCGTC AAATGCAATG A
 
Protein sequence
MALPQLSIWQ PGDGLRKIKY KYHVCLIVIF SVLIRLLFLT DRYLWCDEAS SVLISRHSVD 
NLLFHAAFDV HPPLYYLLLH DWMILWGDSI AAVRSLSLLF GILTVVLVIA LTRWLANERT 
ALLAGWFAAL MPMAVHYSQE TRMYALMGML TLAAALALMM WIKTPTHNRY LVAYALLMTF 
SFYTHYFTLF TLIAHWIAVT ILSCQSHKTA CYLKLPGWWF ANLAITVAYL PWLPVLFNLL 
THLAQLRAGN DIGWIPPVTW RDLPAMYWHF FTGNNGQGFP SFILWLAVGG FIGTVGRISL 
CNGEYERYQL ILFCNLVIPV MLVFIISWWM PLFIDRYFFF SSLSIPPLLA VLLTRAKKAV 
CGFWFILFTL LFGYGSYHNN PEHIDEFKPL VNYINTRHQP NDAVVVSKMF DYLSYVYYNK 
RDYRTFLYTP PNAHGTSGRP NAYGFGSLFY AQADQTYIDT LTTLSKSYHR VWLVSGGNFS 
QDYPLPSEWQ NIANFRSGRF QVQLFVIPTQ QARQMQ