| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1736 |
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| Symbol | mdoD |
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| ID | 6483443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1706180 |
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| End bp | 1707799 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642737116 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_002040868 |
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| Protein GI | 194445996 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.403462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCG TGTGCGGTTC CAGCGGTATT GCTTCACTCT TTTCTCAGGC GGCGTTTGCC
GCGGAATCCG ATATTGCGGA TGGTAAAATT GTCCGTTTTG ATTTTGCTGG TCTGCAATCA
ATGGCCCAGG CGTTAGCGAA AAAGCCCTGG GGCGGCGCGC CGGGACCCTT GCCGGATACG
CTCGCCAATC TGACGCCGCA GGCCTATAAC AGCATTCAGT ATGACGCGGC GCATTCACTC
TGGAACGGTG TTGCCAACCG GCAGCTCGAT ATTCAGTTTT TCCACGTAGG GATGGGCTTT
CGTCGTCGCG TACGCATGTT TTCCGTTGAT ACGACGACGC ATCTTGCTCG CGAGATTCAT
TTTCGCCCGG AACTGTTTAA ATACAACGAT GCCGGCGTCG ATACGACGCA ACTGGAAGGG
CAGAGCGATC TCGGTTTCGC CGGTTTCCGT GTCTTTAAAG CGCCGGAACT GGCGCGGCGC
GATGTCGTCT CCTTCCTGGG CGCCAGTTAT TTCCGGGCGG TAGATGATAC TTATCAGTAT
GGCCTGTCGG CTCGCGGGCT GGCGATAGAT ACCTATACTG ACGGTCAGGA AGAGTTCCCT
GACTTCACCG CATTCTGGTT TGACGCCGCG AAGCCGGGCG ATACTACGTT TACCGTTTAC
GCTCTGCTGG ACAGCGCTAG CGTGACGGGC GCGTATAAGT TTGTGATCCA TTGCGAAAAA
ACGCAGGTGA TCATGGATGT AGAAAACCAT CTCTACGCCC GTAAAGATAT TAAGCAACTT
GGCATTGCGC CGATGACCAG TATGTTTAGC TGTGGGAATA ATGAACGCCG GGTATGCGAC
ACCATTCATC CACAAATTCA CGATTCCGAT CGGCTGGCGA TGTGGCGGGG TAACGGCGAG
TGGATTTGCC GCCCGCTGAA TAATCCGCAG AAATTGCAGT TCAATGCATA TATGGACGAT
AACCCGAAAG GGTTCGGCCT GCTGCAACTC GATCGCGATT TCTCGCATTA TCAGGATGTG
ATGGGCTGGT ACAACAAACG TCCGAGCCTG TGGGTGGAGC CGCGCAGTAA GTGGGGGAAA
GGCGCGGTTA GCCTGATGGA GATCCCAACC ACTGGTGAAA CTCTGGATAA TGTGGTCTGT
TTCTGGCAGC CGGAAAAAGC GATCAAAGCC GGGGATACGC TGGCGTTCAA TTATCGTTTG
TACTGGAGCG CGCAGCCGCC GGTACAATCG CCGCTTGCGC GGGTCATGGC GACCCGTACA
GGGATGGGCG GCTTTCCCGA AGGTTGGGCG CCGGGCGAAC ATTACCCGGA TAAATGGGCG
CGCCGTTTTG CTATTGATTT TGTCGGCGGC GATCTGAAAG CGGCCGCGCC AAAAGGCATT
GAGCCGGTAA TTACGCTCTC CAGCGGTGAG GCGAAGCAGA TTGAGATCCT CTACGTTGAG
CCTTTCGACG GTTATCGTAT CCAGTTTGAC TGGTATCCGA CCTCGGATTC TACGGCACCG
GTGGATATGC GTATGTTCCT GCGCTGCCAG GGGGAAGCTA TCAGCGAAAC CTGGCTGTAT
CAGTATTTCC CGCCCGCGCC GGATAAGCGC CGTTATGTCG ACGATCGTAT CATGCGTTAG
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| Protein sequence | MAAVCGSSGI ASLFSQAAFA AESDIADGKI VRFDFAGLQS MAQALAKKPW GGAPGPLPDT
LANLTPQAYN SIQYDAAHSL WNGVANRQLD IQFFHVGMGF RRRVRMFSVD TTTHLAREIH
FRPELFKYND AGVDTTQLEG QSDLGFAGFR VFKAPELARR DVVSFLGASY FRAVDDTYQY
GLSARGLAID TYTDGQEEFP DFTAFWFDAA KPGDTTFTVY ALLDSASVTG AYKFVIHCEK
TQVIMDVENH LYARKDIKQL GIAPMTSMFS CGNNERRVCD TIHPQIHDSD RLAMWRGNGE
WICRPLNNPQ KLQFNAYMDD NPKGFGLLQL DRDFSHYQDV MGWYNKRPSL WVEPRSKWGK
GAVSLMEIPT TGETLDNVVC FWQPEKAIKA GDTLAFNYRL YWSAQPPVQS PLARVMATRT
GMGGFPEGWA PGEHYPDKWA RRFAIDFVGG DLKAAAPKGI EPVITLSSGE AKQIEILYVE
PFDGYRIQFD WYPTSDSTAP VDMRMFLRCQ GEAISETWLY QYFPPAPDKR RYVDDRIMR
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