Gene SNSL254_A1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1727 
Symbol 
ID6483174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1699266 
End bp1699547 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content51% 
IMG OID642737107 
ProductPTS system lactose/cellobiose-specific transporter subunit IIB 
Protein accessionYP_002040859 
Protein GI194445471 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3414] Phosphotransferase system, galactitol-specific IIB component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.542593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA AGATCCTTGT GGCATGTGGT ACCGGCATGT CGACATCAAC CATGATTGCA 
CAAAAACTGC AGGACTTTCT CGCGGAGCAA GGCATTGCGG CAACCACGGC GCAATGTTGT
CTGAATGAGA TCCCGTTGAA CTGTAACGGT ATGGATCTCA TCGTAACGTC CATGCGTACG
CACAGTGACT ATGGCATCCC GACGCTCAAC GGCGCCGCCC TGCTGACAGG CATCAACGAC
GACGCATTAA AACAAGAAAT CAAGGCGCTG TTAACACAAT AA
 
Protein sequence
MMKKILVACG TGMSTSTMIA QKLQDFLAEQ GIAATTAQCC LNEIPLNCNG MDLIVTSMRT 
HSDYGIPTLN GAALLTGIND DALKQEIKAL LTQ