Gene SNSL254_A1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1703 
Symbol 
ID6485204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1672430 
End bp1673095 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content47% 
IMG OID642737083 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002040835 
Protein GI194444170 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGTA CGGAAAAAAC ACAACATATA AGCCTGACCA CACAGGTTGA AAATCGGTTA 
AAGCATCAAT TGTCTATTGG CGCATTAAAA CCAGGCGCAA GGCTTATCAC TAAAAATATC
GCTCAAGAGT TAGGCGTCAG TATTACGCCG GTGCGTGAGG CCCTGTTAAG GCTGGTCTCT
TCCAGTGCTT TGGCGGTGGC GCCAGCACAG GCGTTTATGG TGCCGGAGAT TTCACTGGAA
AGTTTGCTGG AAATTAATAC GATTCGTACT GCCCTGGAGG AGATGGCGGT GGTCGCCGCT
GCGGGTAAGA TTACCCCGGA TCGCGAGCAG ACGCTGAATG CGCTATTAGA TGAATTTCAA
CAGGCGCTGG AAAGTGGCGT TATGGAGAAA ATTCTTTTGG CCAACCGCGC ATTCCGCTTT
GAGATCTACC ACTACGCGGA TATGCCAACG CTGTATGCCA TGATCGAGCA ATTATGGGTA
CGCCTGGGGC CAAGCCTGCA TTTTTTATAT GATAATTTTA AACTTGATGA TTATCAAAAT
GGCGTTAATC TGTACAGAAA ATTGCTTAAT GCGTTAGTGA CTGGTGATAA AGAAGCCAGT
CGCCACTGCC TACAGAACGT TTTGCAACAA AACGTAGCGA CGATTAAAAA TCAGTATTTC
ATGTAA
 
Protein sequence
MPGTEKTQHI SLTTQVENRL KHQLSIGALK PGARLITKNI AQELGVSITP VREALLRLVS 
SSALAVAPAQ AFMVPEISLE SLLEINTIRT ALEEMAVVAA AGKITPDREQ TLNALLDEFQ
QALESGVMEK ILLANRAFRF EIYHYADMPT LYAMIEQLWV RLGPSLHFLY DNFKLDDYQN
GVNLYRKLLN ALVTGDKEAS RHCLQNVLQQ NVATIKNQYF M