Gene SNSL254_A1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1626 
Symbol 
ID6483093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1591837 
End bp1592364 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content49% 
IMG OID642737012 
Productcompetence damage-inducible protein A 
Protein accessionYP_002040764 
Protein GI194443349 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTAG AACAGCACGA TATTGTCACC CTTGATGAAG CCGAATCCGT CGATAGCCTG 
ACAAAAAAAC TTGGTGATTT ACTGGTTAAC CAGAAACTCC GTCTGACCAC TGCAGAATCC
TGCACTGGCG GGAAACTGGC TTCAGCATTG TGCGCAGCAG AAGATACGCC CTCATTTTAC
GGTGTGGGGT ATGTCACCTT TACTGATGAA GCCAAAGCAA AAATCTTACG CGTACAACGC
CACAGCCTTG CCGAACATAC CGCCGTCAGC GAAGCGGTCG TTACTGAAAT GGCACAGGGC
GCTAAGGATC AGGCTGAGGT CAATATTAGC ATAGCGATCA GCGGCTATGG CGGTCCGGAA
GGCGGCGAAG ATGGCACGCC GGCGGGCACC GTTTGGTTTG CCTGGAATAT TAACAATACA
ACTTTTACAA GCCGACAACA TTTCAACGGA GATTGTCAGG AAGTATTAGA AAAATGCGTA
CGCTTCGCCC TCGCTGAATT GCTTTTTCTG TTAACGAAGA AAGCATAA
 
Protein sequence
MRLEQHDIVT LDEAESVDSL TKKLGDLLVN QKLRLTTAES CTGGKLASAL CAAEDTPSFY 
GVGYVTFTDE AKAKILRVQR HSLAEHTAVS EAVVTEMAQG AKDQAEVNIS IAISGYGGPE
GGEDGTPAGT VWFAWNINNT TFTSRQHFNG DCQEVLEKCV RFALAELLFL LTKKA