Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1581 |
Symbol | |
ID | 6482545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1547260 |
End bp | 1548960 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642736967 |
Product | putative amidohydrolase family |
Protein accession | YP_002040719 |
Protein GI | 194446376 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.737211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAGTC TCGTCCCGCC TCTGCTTTCC AGAACCGCGC TTCTCTTTCT GCTCACGGCC ACAGGCGCAG CCACCGCCGC CCGCCCGGCA GCGGATATTA TTTTACATAA CGGTAATATC ATCACTCTGA ATGATGCCCA GCCGCAGGCC AGCGCGCTGG CGATTTCCGG CTCGCGGATT GTGGCGATTG GCGATGATAC GGCGACAAAT GAATGGCGCG GCGACCATAC CCGTACCATC GATTTACAGG GTAAAACCGT GATACCCGGC CTGACCGATA CCCACATCCA CGCCATTCGC GGCGGACAAA CCTGGACATT CGAAACCTAC TGGTACGACA GCCCTTCGCT TAAAGACGCG CTGGATAAAT TACGCGCCGA CGCGAACCGT CGTCCCCACG ATCAATGGGT AGCCGTAGTG GGATCGTGGA TACCGGCGCA ATTTGCAGAA AACCGGGCGC CGACGGTAGC CGAACTGAGC CACGCCCTTC CCGATCATCC AGCTTATATT CAGTATCTTT ACGACTATGC GTTAGTGAAT CAGCGCGGTA TAGACGTACT TGGCCTTAAC GACACCCCTC CTCCTGATTT AGCGGGAATC CGCGTAGAGC GCGACGCAAA AGGTAGCGCC ACGGGGAAAT TATTTGGTGA CATCGCCGCG TTTAACCAGC TTTTTGCCAG CATAAGTAGT AACGCCGATC GTGAGGGTGG TCTGCGGCAA TTTTTCGCTG ATATGAACGC TCGCGGCGTG ACCGGCATCA TTGACCCCTC TGCCGGGCCT GCCGCCGCTT ATGAGCCTTT ATTTGCAATG CGAAACCAGG GGGATTTACC GCTGCGCGTG GGGTATCGCA TTCCGGTACA GCCAGAAGCG AAAGGTCATG AAGCGCAGTG GTTCAGCAAC CTGATGGCCT TTCGCCCGGC GCGTGCCGAT GACGGGCAAC TGGCTTTTCT TGGCCTGGGG GAAAGCCTGG TGGCCGGAAT GAATGACGGC GTGCGGATGA CCCCAGGGTT TTCTTCCTCA GAGCAGGACA AAACCGCGCT TCGCCAGGTC GCGACATTTG CGGCAAAACG GGGAATACCT CTTGAGATCC ACGCCTATAC CGATGATAGC GCCGACACGA TATTGACGAT TTTTGAGCAG GTAGCGCAGC AGTACGATCT GCGCCCTCTC CGTTGGTCTA TTGCGCATCT GAATACCGGT TCGCCACAGA CGCTTGAGCG AATGCGTAAG CTGGGTCTGG CATACACTGT GCAAATGGGG CCTTACTTTG AGGGGCTTGC CATCCGTGAC GCCAATCCAC CCGGCGCGAC GGACAATTCG CCGCCGGTTC GACTGGCGCT GGATAAAGGG CTTGTCGTGG CTGGCGGTAC CGATTCGACG CGTATTGGCA TTGCCGGTGT CTGGCACGCT ATCGAATATC ATATCACCGG TATAGCGTCA GGCGGTTCCG TGCGTAAACC CGCCAGCGAG CGGCTCACGC GTCTGGAAGC GCTAGCGTTA TATACACGTC ATGCCGCCTG GCTCGCCTTT GCCGAACAAC ACCGGGGCCA GCTTAGCGTC GGAAAACAGG CCGATCTGGC GGTACTCAAT CAGCCATTTA TGACGATGCC GGAAGACAGA ATTGATACCA TTCGCGCTGT TTTGACGCTT GTCGATGGAC GCATTGTTCA CGAAAGTCCG GACCTTAACG CCGGACAATG A
|
Protein sequence | MISLVPPLLS RTALLFLLTA TGAATAARPA ADIILHNGNI ITLNDAQPQA SALAISGSRI VAIGDDTATN EWRGDHTRTI DLQGKTVIPG LTDTHIHAIR GGQTWTFETY WYDSPSLKDA LDKLRADANR RPHDQWVAVV GSWIPAQFAE NRAPTVAELS HALPDHPAYI QYLYDYALVN QRGIDVLGLN DTPPPDLAGI RVERDAKGSA TGKLFGDIAA FNQLFASISS NADREGGLRQ FFADMNARGV TGIIDPSAGP AAAYEPLFAM RNQGDLPLRV GYRIPVQPEA KGHEAQWFSN LMAFRPARAD DGQLAFLGLG ESLVAGMNDG VRMTPGFSSS EQDKTALRQV ATFAAKRGIP LEIHAYTDDS ADTILTIFEQ VAQQYDLRPL RWSIAHLNTG SPQTLERMRK LGLAYTVQMG PYFEGLAIRD ANPPGATDNS PPVRLALDKG LVVAGGTDST RIGIAGVWHA IEYHITGIAS GGSVRKPASE RLTRLEALAL YTRHAAWLAF AEQHRGQLSV GKQADLAVLN QPFMTMPEDR IDTIRAVLTL VDGRIVHESP DLNAGQ
|
| |