Gene SNSL254_A1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1536 
SymbolribE 
ID6486575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1502992 
End bp1503633 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content51% 
IMG OID642736923 
Productriboflavin synthase subunit alpha 
Protein accessionYP_002040675 
Protein GI194446365 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.354258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACGG GGATCGTACA GGGTACCGCG AAACTGGTAT CGATTGATGA AAAACCCAAC 
TTTCGCACCC ATGTGGTGAC GTTACCGGAC TACATGCTGG AGGGGCTGGA GACGGGGGCG
TCGGTAGCGC ATAACGGATG CTGTTTGACG GTGACTGAAA TAAACGGCAA CCAGATAAGT
TTTGATCTGA TGAAAGAAAC GTTGCGCATC ACCAATCTGG GCGCGTTGAG GGTAGGTGAT
GAGGTCAACG TAGAGCGCGC CGCCAAATTC AGCGATGAAA TCGGTGGTCA TCTGATGTCG
GGGCATATTA TTACGACGGC GGAGATCGCG AAAATCCTGA CCTCCGAAAA TAACCATCAG
GTGTGGTTTA AAGTGCAGGA TGCGTCCCTG ATGAAGTATA TCCTGTACAA AGGCTTTATC
GGCGTTGACG GTATCAGTTT GACCGTCGGC GAGGTAACGC CAACGCGCTT CTGCGTGCAT
CTCATTCCGG AAACGCTGGA ACGTACTACG CTTGGCAGAA AAAAACTGGG TGAGCGTGTG
AATATCGAGA TCGATCCGCA AACGCAGGCG GTTGTCGATA CCGTAGAACG CGTACTGGCT
ACACGAGAAA ATGCGGTCAG AAATCAGGCC GACATTGGCT AA
 
Protein sequence
MFTGIVQGTA KLVSIDEKPN FRTHVVTLPD YMLEGLETGA SVAHNGCCLT VTEINGNQIS 
FDLMKETLRI TNLGALRVGD EVNVERAAKF SDEIGGHLMS GHIITTAEIA KILTSENNHQ
VWFKVQDASL MKYILYKGFI GVDGISLTVG EVTPTRFCVH LIPETLERTT LGRKKLGERV
NIEIDPQTQA VVDTVERVLA TRENAVRNQA DIG