Gene SNSL254_A1453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1453 
Symbol 
ID6482716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1420620 
End bp1421357 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content57% 
IMG OID642736845 
Productvitamin B12-transporter ATPase 
Protein accessionYP_002040599 
Protein GI194446043 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4138] ABC-type cobalamin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTAA AGGACGTCGC CGAGAGCACC CGCCTGGGGC CGCTTTCCGG CGAAGTAAGC 
GCAGGAGAGA TCCTTCATCT TGTCGGGCCG AACGGTGCCG GGAAAAGCAC GCTACTGGCG
CGTATGGCGG GGTTAACCTC CGGCGAGGGG AGCATCAGGT TTGGCGGAGC GCCGCTGGAG
GCATGGGCGA CGGCAACGCT TGCCCAACAC CGCGCTTATC TTGCGCAACA GCAAAATCCG
CCGTTCGCCA TGCCGGTCTG GCATTACCTG ACATTGCATC AACCTGATAA AACGCGAACC
GGGCAGCTTA ACGAGGTGGC CGATATGCTT GGATTGGGCG ACAAACTGGG GCGAAGCGTG
AATCAGCTTT CCGGTGGCGA GTGGCAGCGT GTTCGCCTTG CTGCCGTTGT ACTACAAATT
CATCCCGACG CTAATCCGGT CGGTCAATTA TTGCTGCTTG ATGAGCCGAT GAACAGTCTC
GATGTTGCGC AACAAAACGC TCTGGATCGG GTATTACATC ATTTATGTCA GGCAGGAATT
GCGATTGTGA TGAGTAGCCA CGATCTGAAC CACACGCTGC GCCATGCGCA TAAAGCCTGG
TTACTAAAGC GCGGTAAACT CATTGCCTGC GGCCGCCGGG AAGAGGTGCT CACCCCCTCT
TATCTGGCGC AAGCCTACGG TTTGCGCTTT CGACGACTCG ACGTCGAGGG GCATCCAATG
CTCATTTCGG CCACTTAA
 
Protein sequence
MQLKDVAEST RLGPLSGEVS AGEILHLVGP NGAGKSTLLA RMAGLTSGEG SIRFGGAPLE 
AWATATLAQH RAYLAQQQNP PFAMPVWHYL TLHQPDKTRT GQLNEVADML GLGDKLGRSV
NQLSGGEWQR VRLAAVVLQI HPDANPVGQL LLLDEPMNSL DVAQQNALDR VLHHLCQAGI
AIVMSSHDLN HTLRHAHKAW LLKRGKLIAC GRREEVLTPS YLAQAYGLRF RRLDVEGHPM
LISAT