Gene SNSL254_A1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1442 
Symbol 
ID6485078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1409088 
End bp1410047 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content47% 
IMG OID642736834 
Producthypothetical protein 
Protein accessionYP_002040588 
Protein GI194445563 
COG category[S] Function unknown 
COG ID[COG3528] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0123486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAAAT ACAGCTATTG CGCAACGATG ATTGCCGCCA TACTCAGTAC GACCACAATG 
GCCAATGCCA GTAGCCTTGC TATTTCAGTG GCGAATGATG ATGCAGGTAT ATTTCAACCA
TCCTTAAATG CCCTTTATGG GCACCCGGCT GCAGACCGGG GTGATTATAC TGCCGGGCTC
TTTTTAGGCT ACAGCCACGA TCTCACTGAC GCCAGTCAAC TCTCTTTTCA TATCGCGCAA
GATATTTATT CTCCATCAGG TGCCAATAAG AGAAAGCCTG AAGCCGTCAA AGGCGACCGC
GCGTTCAGCG CCTTTCTTCA TACCGGACTG GAGTGGAATT CATTAGCCAC CAATTGGTTA
CGTTATCGTT TAGGTACCGA TATCGGTGTT ATTGGTCCTG ACGCAGGTGG TCAGGAGGTT
CAGAATCGGG CGCATCGAAT AATAGGCGCA GAAAAATACC CTGCCTGGCA GGATCAAATT
GAAAACCGTT ATGGTTATAC AGCAAAAGGA ATGGTGTCCC TTACGCCAGC TATTGATATT
CTGGGCGTCA ATGTGGGCTT CTATCCAGAA GTCTCTGCTG TCGGCGGCAA TCTCTTCCAG
TATTTAGGGT ACGGCGCAAC CGTTGCGCTG GGAAATGATA AGACCTTCAA CTCTGATAAT
GGGTTTGGGT TACTGTCCCG CCGAGGGTTA ATACACACTC AAAAAGAGGG ATTGATCTAT
AAGGTATTTG CTGGCGTTGA GCGCAGGGAA GTTGATAAAA ACTACACGTT ACAGGGGAAA
ACGCTGCAAA CAAAAATGGA AACGGTGGAT ATTAATAAAA CCGTGGATGA ATATCGCGTC
GGTGCCACCA TCGGCTATTC TCCCGTCGCA TTTTCTCTTT CTTTAAACAA AGTCACGTCG
GAATTTCGCA CCGGAGACGA CTATTCTTAT ATCAACGGAG ACATCACCTT CTTCTTCTGA
 
Protein sequence
MNKYSYCATM IAAILSTTTM ANASSLAISV ANDDAGIFQP SLNALYGHPA ADRGDYTAGL 
FLGYSHDLTD ASQLSFHIAQ DIYSPSGANK RKPEAVKGDR AFSAFLHTGL EWNSLATNWL
RYRLGTDIGV IGPDAGGQEV QNRAHRIIGA EKYPAWQDQI ENRYGYTAKG MVSLTPAIDI
LGVNVGFYPE VSAVGGNLFQ YLGYGATVAL GNDKTFNSDN GFGLLSRRGL IHTQKEGLIY
KVFAGVERRE VDKNYTLQGK TLQTKMETVD INKTVDEYRV GATIGYSPVA FSLSLNKVTS
EFRTGDDYSY INGDITFFF