| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1323 |
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| Symbol | potC |
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| ID | 6484279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1310530 |
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| End bp | 1311309 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642736721 |
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| Product | spermidine/putrescine ABC transporter membrane protein |
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| Protein accession | YP_002040478 |
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| Protein GI | 194445367 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.00883478 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGGTC GGCTGCTCCG TGGCGGTTTC ATGACTGCCA TCTATGCGTA TCTGTATATT
CCCATCATTA TTCTGATCGT GAACTCCTTC AACAGTTCGC GGTTCGGCAT TAACTGGCAG
GGCTTTACCA CTAAATGGTA CGAACTCCTA GTCAATAACG ACAGTCTGTT GCAGGCCGCT
CAACATTCAC TGACGATGGC GATTTTTTCA GCGACCTTCG CCACGTTGAT TGGCTCGTTA
ACCGCGGTGG CGCTTTATCG CTACCGCTTT CGCGGGAAGC CATTCGTCAG CGGGATGCTG
TTTGTAGTAA TGATGTCGCC GGATATCGTG ATGGCGATCT CCCTGCTGGT GCTGTTTATG
TTACTCGGCA TTCAACTGGG CTTTTGGTCG TTGCTGTTCT CGCACATCAC CTTTAGCCTG
CCGTTTGTGG TCGTCACGGT CTATTCGCGC CTGAAAGGCT TTGATGTCAG AATGCTGGAA
GCCGCAAAAG ACCTGGGGGC CAGTGAGGTA ACGATTTTAC GCAAAATCAT TCTGCCGCTG
GCGATGCCGG CGGTGGCGGC GGGCTGGTTG CTGAGCTTTA CGTTGTCGAT GGACGATGTA
GTGGTCTCGT CGTTTGTCAC CGGGCCGGGC TATGAAATTT TACCCTTAAA GATTTATTCC
ATGGTAAAAG TCGGCGTTTC ACCAGAAGTG AACGCGCTGG CGACCGTTTT ATTGGTGCTG
TCTCTGGTAA TGGTCATTGC CAGCCAGCTT ATTGCTCGTG ATAAAACCAA GGGCCGATAA
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| Protein sequence | MIGRLLRGGF MTAIYAYLYI PIIILIVNSF NSSRFGINWQ GFTTKWYELL VNNDSLLQAA
QHSLTMAIFS ATFATLIGSL TAVALYRYRF RGKPFVSGML FVVMMSPDIV MAISLLVLFM
LLGIQLGFWS LLFSHITFSL PFVVVTVYSR LKGFDVRMLE AAKDLGASEV TILRKIILPL
AMPAVAAGWL LSFTLSMDDV VVSSFVTGPG YEILPLKIYS MVKVGVSPEV NALATVLLVL
SLVMVIASQL IARDKTKGR
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