| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1263 |
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| Symbol | |
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| ID | 6482777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1252847 |
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| End bp | 1254055 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642736663 |
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| Product | multidrug resistance protein MdtH |
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| Protein accession | YP_002040420 |
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| Protein GI | 194442315 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.21889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGCG TCTCGCAGGC GAGGAACCTG GGTAAATATT TTCTTCTCAT CGATAACATG
TTAGTGGTGC TGGGTTTTTT CGTCGTCTTC CCGCTCATCT CTATTCGTTT TGTCGATCAA
ATGGGGTGGG CTGCCGTAAT GGTAGGGATC GCGCTCGGCC TGCGTCAGTT TATTCAACAA
GGTCTGGGCA TTTTTGGCGG CGCCATCGCC GATCGCTTTG GCGCGAAACC GATGATTGTC
ACCGGTATGC TGATGCGCGC CGCAGGCTTT GCCACCATGG GTATCGCGCA TGAGCCCTGG
CTCTTGTGGT TTTCCTGCTT TCTTTCCGGT CTCGGCGGTA CGCTTTTTGA CCCGCCGCGT
TCAGCGCTGG TGGTCAAATT AATTCGTCCG GAGCAACGGG GCCGCTTCTT CTCTCTGTTG
ATGATGCAGG ACAGCGCGGG CGCGGTGATT GGCGCGCTGC TGGGAAGCTG GTTGCTACAA
TACGATTTTC GCCTGGTCTG CGCGACAGGC GCTATTTTGT TCATATTATG CGCCCTTTTC
AACGCATGGC TGCTTCCGGC CTGGAAGCTA TCAACGGTCA GAACGCCGGT GCGTGAAGGA
ATGCGTCGCG TCATGAGCGA TAAAAGGTTT GTCACCTACG TGCTGACGCT GGCGGGCTAC
TATATGCTGG CGGTACAGGT CATGTTAATG CTGCCGATTA TGGTAAACGA TATCGCCGGT
TCGCCTGCTG CCGTGAAATG GATGTACGCT ATAGAGGCGT GTCTCTCGCT GACGTTGCTC
TATCCGATTG CCCGCTGGAG CGAAAAGCGT TTTCGGCTGG AGCATCGGCT GATGGCCGGT
TTGCTCGTCA TGTCGCTGAG CATGCTCCCC ATCGGGATGG TGGGCAATTT ACAGCAGCTT
TTTACGCTTA TTTGCGCTTT CTACATCGGC TCGGTTATCG CCGAACCGGC GCGCGAAACG
CTCAGCGCGT CGCTCGCGGA CGCGAGGGCG CGGGGAAGCT ATATGGGCTT TAGCCGTCTG
GGATTAGCCA TTGGCGGCGC GATTGGTTAT ATCGGCGGCG GCTGGTTGTT TGATATGGGT
AAAGCGCTTG CGCAGCCTGA ACTACCGTGG ATGATGCTCG GTATTATCGG TTTCATCACC
TTTTTGGCTT TAGGCTGGCA ATTTAGTCAT AAACGCACGC CGCGCCGGAT GCTGGAACCC
GGCGCCTGA
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| Protein sequence | MSRVSQARNL GKYFLLIDNM LVVLGFFVVF PLISIRFVDQ MGWAAVMVGI ALGLRQFIQQ
GLGIFGGAIA DRFGAKPMIV TGMLMRAAGF ATMGIAHEPW LLWFSCFLSG LGGTLFDPPR
SALVVKLIRP EQRGRFFSLL MMQDSAGAVI GALLGSWLLQ YDFRLVCATG AILFILCALF
NAWLLPAWKL STVRTPVREG MRRVMSDKRF VTYVLTLAGY YMLAVQVMLM LPIMVNDIAG
SPAAVKWMYA IEACLSLTLL YPIARWSEKR FRLEHRLMAG LLVMSLSMLP IGMVGNLQQL
FTLICAFYIG SVIAEPARET LSASLADARA RGSYMGFSRL GLAIGGAIGY IGGGWLFDMG
KALAQPELPW MMLGIIGFIT FLALGWQFSH KRTPRRMLEP GA
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