Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1235 |
Symbol | |
ID | 6485131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1229812 |
End bp | 1230645 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642736635 |
Product | curli production assembly/transport component CsgG |
Protein accession | YP_002040392 |
Protein GI | 194443410 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.562011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 0.947173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCT TACTTATTTT GGTTGCCGTT TTATTGTTGA GTGGATGCTT AACTGCCCCG CCGAAACAAG CTGCGAAACC GACATTAATG CCCCGCGCAC AAAGTTACAA AGATTTGACG CACTTACCTG CTCCCACCGG TAAGATCTTT GTTTCGGTAT ATAACATTCA GGATGAAACG GGCCAATTTA AACCTTACCC GGCAAGTAAC TTTTCTACGG CTGTGCCGCA GAGCGCCACC GCTATGTTGG TCACCGCGCT GAAAGATTCG CGCTGGTTTA TCCCGCTGGA ACGACAAGGC TTACAGAATC TTTTGAATGA ACGGAAAATT ATTCGCGCAG CCCAGGAAAA CGGCACCGTG GCGATGAATA ACCGTATCCC GCTTCAGTCG CTGACGGCTG CAAATATTAT GGTGGAAGGT TCTATTATTG GTTATGAAAG TAACGTCAAA TCCGGCGGGG TCGGCGCAAG ATATTTCGGT ATTGGCGCCG ATACGCAGTA TCAGCTGGAT CAGATTGCTG TCAACCTGCG CGTGGTTAAC GTCAGTACGG GCGAGATCCT TTCTTCGGTG AACACCAGTA AAACGATCCT TTCCTATGAA GTACAGGCAG GCGTGTTCCG TTTTATTGAT TACCAGCGCT TACTGGAAGG CGAAATCGGC TATACCTCGA ACGAACCGGT GATGCTGTGT CTGATGTCAG CCATTGAAAC CGGCGTTATC TTCCTCATTA ATGATGGTAT CGATCGCGGA CTGTGGGATT TGCAGAATAA AGCGGACAGG CAAAATGATA TTCTGGTGAA ATACCGTGAG CTGTCAGTAC CGCCAGAATC CTGA
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Protein sequence | MPRLLILVAV LLLSGCLTAP PKQAAKPTLM PRAQSYKDLT HLPAPTGKIF VSVYNIQDET GQFKPYPASN FSTAVPQSAT AMLVTALKDS RWFIPLERQG LQNLLNERKI IRAAQENGTV AMNNRIPLQS LTAANIMVEG SIIGYESNVK SGGVGARYFG IGADTQYQLD QIAVNLRVVN VSTGEILSSV NTSKTILSYE VQAGVFRFID YQRLLEGEIG YTSNEPVMLC LMSAIETGVI FLINDGIDRG LWDLQNKADR QNDILVKYRE LSVPPES
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