Gene SNSL254_A1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1234 
Symbol 
ID6482914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1229279 
End bp1229773 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content53% 
IMG OID642736634 
Productinner membrane protein YcdZ 
Protein accessionYP_002040391 
Protein GI194445094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.698042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.958349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCG CCATGAACAT ACTTCTTTCT ATTGCTATCA CGACGGGCAT CCTTTCTGGA 
ATATGGGGAT GGGTGGCCGT CTCCCTGGGG TTACTAAGCT GGGCCGGTTT TTTAGGCTGT 
ACGGCTTATT TCGCCTGTCC GAAGGGCGGC TTTAAGGGAT TGTTGATTTC CGCCTGTACG 
CTGTTAAGCG GTATGGTGTG GGCGCTGGTC ATTATTCACG GTAGCGCGCT GGCGCCGCAT 
CTGGAAATTG TCAGTTACGT GTTGACGGGG ATCGTGGCAT TCCTGATGTG TATCCAGGCA 
AAGCAGCTAT TGCTTTCTTT TGTTCCGGGA ACATTTATCG GCGCCTGCGC GACATTTGCA 
GGGCAGGGTG ACTGGCGGTT GGTATTACCG TCGCTGGCGC TGGGGCTAAT CTTTGGCTAT 
GCCATGAAAA ATAGTGGGCT ATGGCTGGCA TCACGCCGCG AGCAACATTC AGCGAATACG 
GCGGTCACAA AATAA
 
Protein sequence
MMRAMNILLS IAITTGILSG IWGWVAVSLG LLSWAGFLGC TAYFACPKGG FKGLLISACT 
LLSGMVWALV IIHGSALAPH LEIVSYVLTG IVAFLMCIQA KQLLLSFVPG TFIGACATFA 
GQGDWRLVLP SLALGLIFGY AMKNSGLWLA SRREQHSANT AVTK