Gene SNSL254_A1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1177 
Symbol 
ID6483645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1171307 
End bp1171987 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content48% 
IMG OID642736579 
Productputative bacteriophage protein 
Protein accessionYP_002040337 
Protein GI194445112 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.223449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0715327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT ATACGGACTT AATCACCAAC TATCATGCGA CAAAACCTAA ATTCGTTGAA 
CACATCGATT TAGTGACCAG GCCGTTAGCT GAAACCTCAG CCGCAATGAA GGGACTCATA 
AACGCTTTTG ATATTGATCA TGCGGCAGGA GTACAACTCG ATATTCTCGG CCAGTGGATA 
GGGTTAAGCC GGGTTGTAAG CCAGCCAATA AGCGGTGTCT ATTTCAGCTG GGACACTGAC 
GGACTCGGAT ATGACCAGGG CGTCTGGCAG GGGCCATATG ATCCGGATTC GGGTTATACC 
TCGTTGAGCG ATGAAACCTA TCGCATCGTT CTAAAAACGA AGACAGCAAT TAACAACTGG 
GACGGAAGAA ACGACTCGCT GGCTCCCATT CTTGACGCCG CTCTGGACGG TTCCGGCCTG 
AAGATGCAGA TCGTCGATAA CCAGGATATG ACCATCGGTA TCTGGGTTTT CCCTGAAACA 
GATATTTCAG CGGTCTCTCT CGAACTTATT GCTGCGATAC GACAAGGGTA TCTGACGGTA 
AAGGCCGCTG GTGTATGGGG CGGAAGTATT GAAATTCCTT CGGTGGAAAC GCCTTCTGAA 
GGAAACAGGT TTTTTGGGTT TGATATGGAT AACGAATATA TCAGCGGGTT TGATGCCGGT 
TCATGGGGGA CATTACTCTG A
 
Protein sequence
MSKYTDLITN YHATKPKFVE HIDLVTRPLA ETSAAMKGLI NAFDIDHAAG VQLDILGQWI 
GLSRVVSQPI SGVYFSWDTD GLGYDQGVWQ GPYDPDSGYT SLSDETYRIV LKTKTAINNW 
DGRNDSLAPI LDAALDGSGL KMQIVDNQDM TIGIWVFPET DISAVSLELI AAIRQGYLTV 
KAAGVWGGSI EIPSVETPSE GNRFFGFDMD NEYISGFDAG SWGTLL