Gene SNSL254_A1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1175 
Symbol 
ID6485570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1169757 
End bp1170110 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content51% 
IMG OID642736577 
Productputative bacteriophage protein 
Protein accessionYP_002040335 
Protein GI194444487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.353407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.0228767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTACA GACGTGAAGA CGGCGAAGAT GATTACACTT TTGGTAGTGG CGATGATACC 
TGGCTGATTA ACTCGCCAGA AGCTGTCGCG CAGGCGGTAA AAACACGATT CGCATTGTGG 
TACGGGCAGT GGTTCCTCGA TAAGACAGAG GGAACACCAT GGATTCAGTC TGTGCTCGGT 
AAGCAAAAGC CGGAAACCTA TAATCTGGCG ATCCGCAAGC GTATCCTCGA AACGCGGGGC 
GTTAAATCCA TTCTCTCTTT CAATACGACA GTGAACACCT CGACGCGCCG CGTCCAGTTC 
TTCGCTGAAA TCGACACTAT CTACGGAACA ACGACAGTAA CCAGCGAGGC ATAA
 
Protein sequence
MRYRREDGED DYTFGSGDDT WLINSPEAVA QAVKTRFALW YGQWFLDKTE GTPWIQSVLG 
KQKPETYNLA IRKRILETRG VKSILSFNTT VNTSTRRVQF FAEIDTIYGT TTVTSEA