Gene SNSL254_A1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1154 
Symbol 
ID6486606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1153141 
End bp1154763 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content55% 
IMG OID642736556 
Productgp33 TerL 
Protein accessionYP_002040314 
Protein GI194445851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.041853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.000000000115818 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGTTAC CATTCTCCTT CGATTTCAAA CATCCAGATT ACCAGATGGT GTTTGAATGG 
CGGATGGAAC GCTTACAGCG CATTCGCCAG CATCCTGAGA TGCTGCCCGC GTTGAAGCAG
TTTTATCGTA CTAACCCGGC TCAGTTCATC ATCGACTGGG GCATGACGAC GGACCCGCGT
AATATCGATT ATGGCCTGCC GGTCACCATC CCTTTTCTGC TATTCCCGAA ACAGGAAGAG
TGGATTCACT GGATTATGGA ACGCTGGGGC AAGCGGGAGA ACGGTATCAC CGAAAAATCC
CGTGAAATGG GGCTGAGCTG GACGGCGATC GGGATGGCCT GTTCGCTTTG CCTGTTTAAC
AAAGAGATGG TCATCGGCTT TGGTTCCCGT AAAGAGGAAT ATGTCGACAG TACTGGTGAC
CCTAAGGCGC TGTTCTGGAA GGCGCGCAAG TTTGTGGAGA CGCTGCCCGT CGAGTTTCGT
GGGTCGTGGA ATGAGAAGAA GCATGCACCG TACATGCGTG TTGAATTTCC TGAGACAGGC
GCGGTCATCA AGGGCGAAGC TGGTGACAAT ATTGGACGTG GTGACCGAAC CACACTCTAT
CTGGTGGATG AGGCTGCATT TCTGCAACGC CCGCTACTGA TTGATGCGGC GTTATCGCAA
ACCACCCGTT GCCGTATTGA CCTGAGTTCG GTCAACGGCA TGGCGAACCC GTTTGCGCAG
AAACGCCACG GCGGAAAGAT ACCTGTATTC ACATTCCACT GGCGCAGCGA CCCCCGTAAG
GATGATGAGT GGTATCGCAG GGAATGCGAG AAAATCGACA ATCCGGTGGT AGTGGCGCAG
GAGCTTGACC TGAACTACAG CGCATCAGCG GAAGGTGTCC TGATCCCCTC AGACTGGGTA
CAGGCTGCTG TTGATGCGCA TATCAGGCTG GGCATCCAGC CAACTGGCAA ACGACTGGGC
GCGATGGACG TCGCCGACGA AGGTCGGGAC AAAAACGCCT TTTCAACCCG CCACGGTTTC
CTTCTGGAGA ACGTGCGGGA ATGGTCCGGC GTGGGCAGCG ACATTTACCA GTCTGTTGAG
AAGGTCTTCG GCTTTTGTGA ACAGGATAAC CTCGAAGAGT TTCGCTTCGA CGAGGACGGT
CTGGGGGCTG GCGTTCGCGG CGATGCGCGT GCCATTAACG AGTTACGCAA AGCCGCCCGC
AGGCCGCCAA TACTTGCCAC ACCGTTTCGT GGTAGCGGCG CGGTATTCGA TCCTGATGAC
GAAGCCGTAC GGGGCGACAA TGGGCAGGCT GCACGCCTGA ACAAGGATTT CTTCGCCAAC
GCCAAGGCAC AGAGCTGGTG GTACTTACGC AAGCTCTTCC GGAATACCTA CCGCGCCGTT
GTTGAAGGTA TGGCCTACAA CCCGGACGAA ATTATCTCCA TCAGCAGCAC GATGGAGAGC
AAAGACAAAC TCATCATCGA GCTTTCGCAA CCAACCTACT CGATTAACGG CGTGGGGAAA
ATCGTTGTGG ATAAACAGCC TGACGGTACC AGGTCGCCGA ACCTCGCCGA CTCGGTGATG
ATCAGCTACG CGCCAATGAA TTCAGCCCTC AATATCTGGG AGCTGCTAGG GAGACAGGCC
TGA
 
Protein sequence
MPLPFSFDFK HPDYQMVFEW RMERLQRIRQ HPEMLPALKQ FYRTNPAQFI IDWGMTTDPR 
NIDYGLPVTI PFLLFPKQEE WIHWIMERWG KRENGITEKS REMGLSWTAI GMACSLCLFN
KEMVIGFGSR KEEYVDSTGD PKALFWKARK FVETLPVEFR GSWNEKKHAP YMRVEFPETG
AVIKGEAGDN IGRGDRTTLY LVDEAAFLQR PLLIDAALSQ TTRCRIDLSS VNGMANPFAQ
KRHGGKIPVF TFHWRSDPRK DDEWYRRECE KIDNPVVVAQ ELDLNYSASA EGVLIPSDWV
QAAVDAHIRL GIQPTGKRLG AMDVADEGRD KNAFSTRHGF LLENVREWSG VGSDIYQSVE
KVFGFCEQDN LEEFRFDEDG LGAGVRGDAR AINELRKAAR RPPILATPFR GSGAVFDPDD
EAVRGDNGQA ARLNKDFFAN AKAQSWWYLR KLFRNTYRAV VEGMAYNPDE IISISSTMES
KDKLIIELSQ PTYSINGVGK IVVDKQPDGT RSPNLADSVM ISYAPMNSAL NIWELLGRQA