Gene SNSL254_A1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1067 
Symbol 
ID6482178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1076853 
End bp1077386 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content51% 
IMG OID642736472 
Productgifsy-2 prophage protein 
Protein accessionYP_002040231 
Protein GI194442947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00000488797 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATCAGG AAATTAAAAG CCTCGAATTA AACATCACAC AGCTTTCGGC CATCACTGGT 
GCACACCGAC AGACCATCGC CAGCAGGCTG AAGGGCGTAA AAACCTCAGG TGGGAACGGT 
AGTAACCTGA AAATCTACCG GCTGGTGGAT ATTCTGACCG CCATGATGAC GATGCCGGCT 
GTTACCGGGG AGAATGACCC CAATAAGATG AAACCCTCAG ATCGACGGGC ATGGTTTCAG 
TCGGAAATGA CGCGTATTGA GCTGGAAAAG GAGATGAGAA CTCTGATCCC GGCCAGCGAG 
GTGCTGAGCG TTTATGCTGT CATGGCAAAA ACGGTCGTCA AGACACTGGA GATACTGCCG 
GACTTACTGG AAAGGGATGC GGCATTGCCG CCTGATGCGC TGGAAATGAC GCAAAAAATT 
ATTGATCAAC TCAGGGAAGA TCTGGCCAGC ATGACATACC AGGCCTGCGC GGATGCTATA 
AACGGAGATG ATGATGACAA CGGTGACGAA GGGCAAGAGG AAGAGCAGGA ATAG
 
Protein sequence
MDQEIKSLEL NITQLSAITG AHRQTIASRL KGVKTSGGNG SNLKIYRLVD ILTAMMTMPA 
VTGENDPNKM KPSDRRAWFQ SEMTRIELEK EMRTLIPASE VLSVYAVMAK TVVKTLEILP 
DLLERDAALP PDALEMTQKI IDQLREDLAS MTYQACADAI NGDDDDNGDE GQEEEQE